Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFPL1O75677 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFPL1O75677 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.75■□□□□ 0.91
RFPL1O75677 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFPL1O75677 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFPL1O75677 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RFPL1O75677 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.75■□□□□ 0.91
RFPL1O75677 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.75■□□□□ 0.91
RFPL1O75677 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.75■□□□□ 0.91
RFPL1O75677 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RFPL1O75677 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RFPL1O75677 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFPL1O75677 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.75■□□□□ 0.91
RFPL1O75677 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFPL1O75677 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RFPL1O75677 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RFPL1O75677 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFPL1O75677 BX005040.4-201ENST00000637145 1518 ntBASIC20.74■□□□□ 0.91
RFPL1O75677 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFPL1O75677 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RFPL1O75677 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFPL1O75677 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFPL1O75677 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RFPL1O75677 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFPL1O75677 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.74■□□□□ 0.91
RFPL1O75677 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.74■□□□□ 0.91
RFPL1O75677 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.74■□□□□ 0.91
RFPL1O75677 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFPL1O75677 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RFPL1O75677 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.74■□□□□ 0.91
RFPL1O75677 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.74■□□□□ 0.91
RFPL1O75677 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.74■□□□□ 0.91
RFPL1O75677 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFPL1O75677 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFPL1O75677 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.74■□□□□ 0.91
RFPL1O75677 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFPL1O75677 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFPL1O75677 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFPL1O75677 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFPL1O75677 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.73■□□□□ 0.91
RFPL1O75677 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFPL1O75677 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFPL1O75677 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFPL1O75677 AC004911.1-201ENST00000416316 871 ntBASIC20.73■□□□□ 0.91
RFPL1O75677 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.73■□□□□ 0.91
RFPL1O75677 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RFPL1O75677 CCDC92B-201ENST00000575506 885 ntBASIC20.73■□□□□ 0.91
RFPL1O75677 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFPL1O75677 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.73■□□□□ 0.91
RFPL1O75677 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.73■□□□□ 0.91
RFPL1O75677 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFPL1O75677 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RFPL1O75677 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.72■□□□□ 0.91
RFPL1O75677 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
RFPL1O75677 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFPL1O75677 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFPL1O75677 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.72■□□□□ 0.91
RFPL1O75677 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFPL1O75677 AC005224.4-201ENST00000583262 1652 ntBASIC20.72■□□□□ 0.91
RFPL1O75677 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.72■□□□□ 0.91
RFPL1O75677 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.72■□□□□ 0.91
RFPL1O75677 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.72■□□□□ 0.91
RFPL1O75677 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.72■□□□□ 0.91
RFPL1O75677 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RFPL1O75677 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFPL1O75677 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RFPL1O75677 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFPL1O75677 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFPL1O75677 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFPL1O75677 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.71■□□□□ 0.91
RFPL1O75677 PCDHAC2-203ENST00000615316 3011 ntBASIC20.71■□□□□ 0.91
RFPL1O75677 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RFPL1O75677 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.71■□□□□ 0.91
RFPL1O75677 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFPL1O75677 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFPL1O75677 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.71■□□□□ 0.91
RFPL1O75677 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.71■□□□□ 0.91
RFPL1O75677 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFPL1O75677 AL162377.1-201ENST00000618844 1793 ntBASIC20.71■□□□□ 0.91
RFPL1O75677 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.71■□□□□ 0.91
RFPL1O75677 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFPL1O75677 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFPL1O75677 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFPL1O75677 AFG3L1P-217ENST00000557444 2447 ntBASIC20.7■□□□□ 0.91
RFPL1O75677 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RFPL1O75677 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
RFPL1O75677 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.7■□□□□ 0.9
RFPL1O75677 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.7■□□□□ 0.9
RFPL1O75677 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.7■□□□□ 0.9
RFPL1O75677 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFPL1O75677 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RFPL1O75677 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.7■□□□□ 0.9
RFPL1O75677 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.7■□□□□ 0.9
RFPL1O75677 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.7■□□□□ 0.9
RFPL1O75677 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFPL1O75677 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.7■□□□□ 0.9
RFPL1O75677 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFPL1O75677 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFPL1O75677 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFPL1O75677 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms