Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.51■■□□□ 1.03
OPHN1O60890 AC079140.4-201ENST00000507448 529 ntBASIC21.51■■□□□ 1.03
OPHN1O60890 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.51■■□□□ 1.03
OPHN1O60890 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.51■■□□□ 1.03
OPHN1O60890 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
OPHN1O60890 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
OPHN1O60890 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
OPHN1O60890 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
OPHN1O60890 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
OPHN1O60890 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
OPHN1O60890 AL049796.1-201ENST00000565336 1766 ntBASIC21.51■■□□□ 1.03
OPHN1O60890 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
OPHN1O60890 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
OPHN1O60890 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
OPHN1O60890 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
OPHN1O60890 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
OPHN1O60890 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
OPHN1O60890 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.5■■□□□ 1.03
OPHN1O60890 AL121832.2-201ENST00000610979 668 ntBASIC21.5■■□□□ 1.03
OPHN1O60890 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.5■■□□□ 1.03
OPHN1O60890 AC066615.1-201ENST00000640911 628 ntBASIC21.5■■□□□ 1.03
OPHN1O60890 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.5■■□□□ 1.03
OPHN1O60890 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
OPHN1O60890 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.5■■□□□ 1.03
OPHN1O60890 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.5■■□□□ 1.03
OPHN1O60890 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
OPHN1O60890 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
OPHN1O60890 AL121603.2-201ENST00000557373 2117 ntBASIC21.49■■□□□ 1.03
OPHN1O60890 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
OPHN1O60890 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
OPHN1O60890 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
OPHN1O60890 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.49■■□□□ 1.03
OPHN1O60890 TSPY20P-201ENST00000450910 630 ntBASIC21.49■■□□□ 1.03
OPHN1O60890 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
OPHN1O60890 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
OPHN1O60890 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.49■■□□□ 1.03
OPHN1O60890 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
OPHN1O60890 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.49■■□□□ 1.03
OPHN1O60890 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
OPHN1O60890 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.49■■□□□ 1.03
OPHN1O60890 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
OPHN1O60890 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
OPHN1O60890 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
OPHN1O60890 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
OPHN1O60890 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
OPHN1O60890 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
OPHN1O60890 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.48■■□□□ 1.03
OPHN1O60890 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
OPHN1O60890 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
OPHN1O60890 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
OPHN1O60890 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
OPHN1O60890 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.48■■□□□ 1.03
OPHN1O60890 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.48■■□□□ 1.03
OPHN1O60890 AC142086.2-201ENST00000569753 217 ntBASIC21.48■■□□□ 1.03
OPHN1O60890 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
OPHN1O60890 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
OPHN1O60890 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
OPHN1O60890 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
OPHN1O60890 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
OPHN1O60890 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
OPHN1O60890 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
OPHN1O60890 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
OPHN1O60890 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
OPHN1O60890 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
OPHN1O60890 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.47■■□□□ 1.03
OPHN1O60890 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.47■■□□□ 1.03
OPHN1O60890 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
OPHN1O60890 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.47■■□□□ 1.03
OPHN1O60890 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
OPHN1O60890 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.46■■□□□ 1.03
OPHN1O60890 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
OPHN1O60890 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
OPHN1O60890 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
OPHN1O60890 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.46■■□□□ 1.03
OPHN1O60890 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.46■■□□□ 1.03
OPHN1O60890 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.46■■□□□ 1.03
OPHN1O60890 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
OPHN1O60890 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
OPHN1O60890 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
OPHN1O60890 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
OPHN1O60890 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
OPHN1O60890 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
OPHN1O60890 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.45■■□□□ 1.02
OPHN1O60890 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
OPHN1O60890 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
OPHN1O60890 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.45■■□□□ 1.02
OPHN1O60890 AC083906.2-201ENST00000511578 360 ntBASIC21.45■■□□□ 1.02
OPHN1O60890 KRT18P6-201ENST00000555540 1265 ntBASIC21.45■■□□□ 1.02
OPHN1O60890 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.45■■□□□ 1.02
OPHN1O60890 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
OPHN1O60890 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.45■■□□□ 1.02
OPHN1O60890 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
OPHN1O60890 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
OPHN1O60890 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
OPHN1O60890 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
OPHN1O60890 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.45■■□□□ 1.02
OPHN1O60890 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
OPHN1O60890 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
OPHN1O60890 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.44■■□□□ 1.02
OPHN1O60890 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms