Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM13O60858 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM13O60858 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM13O60858 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM13O60858 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM13O60858 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM13O60858 AC135279.3-201ENST00000610945 1311 ntBASIC20.33■□□□□ 0.85
TRIM13O60858 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM13O60858 AFG3L1P-217ENST00000557444 2447 ntBASIC20.33■□□□□ 0.85
TRIM13O60858 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TRIM13O60858 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM13O60858 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM13O60858 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.33■□□□□ 0.85
TRIM13O60858 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM13O60858 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM13O60858 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.33■□□□□ 0.85
TRIM13O60858 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.33■□□□□ 0.85
TRIM13O60858 AC008764.7-201ENST00000593779 1081 ntBASIC20.33■□□□□ 0.85
TRIM13O60858 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM13O60858 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TRIM13O60858 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM13O60858 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.33■□□□□ 0.84
TRIM13O60858 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TRIM13O60858 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM13O60858 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM13O60858 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.33■□□□□ 0.84
TRIM13O60858 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM13O60858 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM13O60858 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
TRIM13O60858 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.33■□□□□ 0.84
TRIM13O60858 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM13O60858 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRIM13O60858 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM13O60858 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM13O60858 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.32■□□□□ 0.84
TRIM13O60858 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM13O60858 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TRIM13O60858 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TRIM13O60858 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM13O60858 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM13O60858 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM13O60858 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRIM13O60858 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM13O60858 TSPY26P-201ENST00000476365 1326 ntBASIC20.31■□□□□ 0.84
TRIM13O60858 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM13O60858 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM13O60858 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
TRIM13O60858 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM13O60858 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM13O60858 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM13O60858 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM13O60858 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM13O60858 EEF1DP3-203ENST00000566025 782 ntBASIC20.31■□□□□ 0.84
TRIM13O60858 AC053503.5-201ENST00000601508 636 ntBASIC20.31■□□□□ 0.84
TRIM13O60858 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM13O60858 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM13O60858 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM13O60858 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM13O60858 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM13O60858 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM13O60858 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRIM13O60858 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM13O60858 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRIM13O60858 AP004607.4-201ENST00000530158 1459 ntBASIC20.3■□□□□ 0.84
TRIM13O60858 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM13O60858 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM13O60858 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM13O60858 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
TRIM13O60858 AC099791.1-201ENST00000416440 715 ntBASIC20.3■□□□□ 0.84
TRIM13O60858 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.3■□□□□ 0.84
TRIM13O60858 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM13O60858 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM13O60858 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM13O60858 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM13O60858 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM13O60858 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM13O60858 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM13O60858 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRIM13O60858 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM13O60858 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM13O60858 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM13O60858 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM13O60858 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM13O60858 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM13O60858 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM13O60858 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM13O60858 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms