Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNCRIPO60506 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNCRIPO60506 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNCRIPO60506 CDV3P1-201ENST00000471403 739 ntBASIC21.13■□□□□ 0.97
SYNCRIPO60506 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.13■□□□□ 0.97
SYNCRIPO60506 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNCRIPO60506 FBXW4P1-201ENST00000426721 2239 ntBASIC21.13■□□□□ 0.97
SYNCRIPO60506 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.13■□□□□ 0.97
SYNCRIPO60506 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.13■□□□□ 0.97
SYNCRIPO60506 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
SYNCRIPO60506 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNCRIPO60506 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.13■□□□□ 0.97
SYNCRIPO60506 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.12■□□□□ 0.97
SYNCRIPO60506 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.12■□□□□ 0.97
SYNCRIPO60506 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SYNCRIPO60506 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.12■□□□□ 0.97
SYNCRIPO60506 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
SYNCRIPO60506 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SYNCRIPO60506 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.12■□□□□ 0.97
SYNCRIPO60506 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNCRIPO60506 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SYNCRIPO60506 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SYNCRIPO60506 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNCRIPO60506 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNCRIPO60506 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SYNCRIPO60506 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNCRIPO60506 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNCRIPO60506 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.11■□□□□ 0.97
SYNCRIPO60506 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.11■□□□□ 0.97
SYNCRIPO60506 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SYNCRIPO60506 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNCRIPO60506 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNCRIPO60506 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SYNCRIPO60506 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNCRIPO60506 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SYNCRIPO60506 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNCRIPO60506 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNCRIPO60506 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 LSM12P1-201ENST00000411836 588 ntBASIC21.1■□□□□ 0.97
SYNCRIPO60506 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.1■□□□□ 0.97
SYNCRIPO60506 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNCRIPO60506 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNCRIPO60506 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNCRIPO60506 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SYNCRIPO60506 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SYNCRIPO60506 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 POU5F1P3-201ENST00000428824 1078 ntBASIC21.09■□□□□ 0.97
SYNCRIPO60506 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.09■□□□□ 0.97
SYNCRIPO60506 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNCRIPO60506 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNCRIPO60506 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNCRIPO60506 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.08■□□□□ 0.97
SYNCRIPO60506 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SYNCRIPO60506 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.08■□□□□ 0.97
SYNCRIPO60506 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SYNCRIPO60506 AC091799.1-201ENST00000422823 811 ntBASIC21.08■□□□□ 0.97
SYNCRIPO60506 DUSP5P2-201ENST00000426873 1033 ntBASIC21.08■□□□□ 0.97
SYNCRIPO60506 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SYNCRIPO60506 AC091874.3-201ENST00000512672 1195 ntBASIC21.08■□□□□ 0.97
SYNCRIPO60506 FAM21FP-204ENST00000608637 956 ntBASIC21.08■□□□□ 0.97
SYNCRIPO60506 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.08■□□□□ 0.97
SYNCRIPO60506 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SYNCRIPO60506 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.08■□□□□ 0.96
SYNCRIPO60506 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SYNCRIPO60506 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SYNCRIPO60506 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNCRIPO60506 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.07■□□□□ 0.96
SYNCRIPO60506 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNCRIPO60506 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SYNCRIPO60506 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNCRIPO60506 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.07■□□□□ 0.96
SYNCRIPO60506 AC083880.1-201ENST00000608266 535 ntBASIC21.07■□□□□ 0.96
SYNCRIPO60506 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNCRIPO60506 MYC-209ENST00000641252 345 ntBASIC21.07■□□□□ 0.96
SYNCRIPO60506 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SYNCRIPO60506 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNCRIPO60506 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SYNCRIPO60506 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.07■□□□□ 0.96
SYNCRIPO60506 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNCRIPO60506 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYNCRIPO60506 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.06■□□□□ 0.96
SYNCRIPO60506 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms