Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.88■□□□□ 0.77
DUX1O43812 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.88■□□□□ 0.77
DUX1O43812 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX1O43812 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.88■□□□□ 0.77
DUX1O43812 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
DUX1O43812 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DUX1O43812 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
DUX1O43812 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DUX1O43812 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX1O43812 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.87■□□□□ 0.77
DUX1O43812 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.87■□□□□ 0.77
DUX1O43812 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.87■□□□□ 0.77
DUX1O43812 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.87■□□□□ 0.77
DUX1O43812 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.87■□□□□ 0.77
DUX1O43812 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.87■□□□□ 0.77
DUX1O43812 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX1O43812 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
DUX1O43812 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
DUX1O43812 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.86■□□□□ 0.77
DUX1O43812 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.86■□□□□ 0.77
DUX1O43812 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
DUX1O43812 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DUX1O43812 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
DUX1O43812 UNC93B5-201ENST00000530315 699 ntBASIC19.86■□□□□ 0.77
DUX1O43812 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.86■□□□□ 0.77
DUX1O43812 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
DUX1O43812 AC060766.5-201ENST00000590539 871 ntBASIC19.86■□□□□ 0.77
DUX1O43812 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
DUX1O43812 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
DUX1O43812 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.86■□□□□ 0.77
DUX1O43812 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.86■□□□□ 0.77
DUX1O43812 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX1O43812 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.85■□□□□ 0.77
DUX1O43812 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.85■□□□□ 0.77
DUX1O43812 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.85■□□□□ 0.77
DUX1O43812 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.85■□□□□ 0.77
DUX1O43812 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.85■□□□□ 0.77
DUX1O43812 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.85■□□□□ 0.77
DUX1O43812 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.85■□□□□ 0.77
DUX1O43812 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 AC105020.6-201ENST00000621523 1217 ntBASIC19.85■□□□□ 0.77
DUX1O43812 HLA-B-256ENST00000639848 1089 ntBASIC19.85■□□□□ 0.77
DUX1O43812 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
DUX1O43812 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.85■□□□□ 0.77
DUX1O43812 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
DUX1O43812 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX1O43812 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.84■□□□□ 0.77
DUX1O43812 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX1O43812 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
DUX1O43812 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX1O43812 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
DUX1O43812 PRORSD1P-201ENST00000295112 541 ntBASIC19.84■□□□□ 0.77
DUX1O43812 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DUX1O43812 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.84■□□□□ 0.77
DUX1O43812 AC026366.1-201ENST00000488803 879 ntBASIC19.84■□□□□ 0.77
DUX1O43812 AP003097.1-201ENST00000530657 1135 ntBASIC19.84■□□□□ 0.77
DUX1O43812 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.84■□□□□ 0.77
DUX1O43812 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.84■□□□□ 0.77
DUX1O43812 AC006058.3-201ENST00000606217 1069 ntBASIC19.84■□□□□ 0.77
DUX1O43812 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX1O43812 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX1O43812 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX1O43812 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DUX1O43812 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms