Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ACTN4O43707 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ACTN4O43707 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ACTN4O43707 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ACTN4O43707 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ACTN4O43707 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ACTN4O43707 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.21■■□□□ 1.31
ACTN4O43707 CCDC92B-201ENST00000575506 885 ntBASIC23.21■■□□□ 1.31
ACTN4O43707 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.21■■□□□ 1.31
ACTN4O43707 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.21■■□□□ 1.31
ACTN4O43707 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
ACTN4O43707 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ACTN4O43707 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ACTN4O43707 FP700111.2-201ENST00000619190 1892 ntBASIC23.21■■□□□ 1.31
ACTN4O43707 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
ACTN4O43707 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ACTN4O43707 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACTN4O43707 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
ACTN4O43707 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACTN4O43707 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACTN4O43707 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACTN4O43707 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.2■■□□□ 1.3
ACTN4O43707 SLC7A5P2-201ENST00000553010 536 ntBASIC23.2■■□□□ 1.3
ACTN4O43707 AP001160.3-201ENST00000601484 763 ntBASIC23.2■■□□□ 1.3
ACTN4O43707 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.2■■□□□ 1.3
ACTN4O43707 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.2■■□□□ 1.3
ACTN4O43707 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACTN4O43707 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
ACTN4O43707 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ACTN4O43707 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.19■■□□□ 1.3
ACTN4O43707 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ACTN4O43707 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ACTN4O43707 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ACTN4O43707 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.19■■□□□ 1.3
ACTN4O43707 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.19■■□□□ 1.3
ACTN4O43707 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
ACTN4O43707 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.19■■□□□ 1.3
ACTN4O43707 DUX4L2-201ENST00000561772 1275 ntBASIC23.19■■□□□ 1.3
ACTN4O43707 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.19■■□□□ 1.3
ACTN4O43707 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.19■■□□□ 1.3
ACTN4O43707 DUX4L6-201ENST00000626483 1275 ntBASIC23.19■■□□□ 1.3
ACTN4O43707 DUX4L1-201ENST00000627662 1275 ntBASIC23.19■■□□□ 1.3
ACTN4O43707 DUX4L8-201ENST00000629013 1275 ntBASIC23.19■■□□□ 1.3
ACTN4O43707 DUX4L3-201ENST00000630187 1275 ntBASIC23.19■■□□□ 1.3
ACTN4O43707 DUX4L7-201ENST00000630678 1275 ntBASIC23.19■■□□□ 1.3
ACTN4O43707 DUX4L5-201ENST00000630834 1275 ntBASIC23.19■■□□□ 1.3
ACTN4O43707 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ACTN4O43707 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.19■■□□□ 1.3
ACTN4O43707 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.19■■□□□ 1.3
ACTN4O43707 AC020907.5-201ENST00000624372 1936 ntBASIC23.19■■□□□ 1.3
ACTN4O43707 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ACTN4O43707 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
ACTN4O43707 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ACTN4O43707 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ACTN4O43707 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
ACTN4O43707 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
ACTN4O43707 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ACTN4O43707 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.18■■□□□ 1.3
ACTN4O43707 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ACTN4O43707 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.18■■□□□ 1.3
ACTN4O43707 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.18■■□□□ 1.3
ACTN4O43707 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.18■■□□□ 1.3
ACTN4O43707 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.18■■□□□ 1.3
ACTN4O43707 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
ACTN4O43707 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ACTN4O43707 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ACTN4O43707 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ACTN4O43707 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.17■■□□□ 1.3
ACTN4O43707 AC004854.2-201ENST00000608450 1441 ntBASIC23.17■■□□□ 1.3
ACTN4O43707 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ACTN4O43707 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ACTN4O43707 KRT18P14-201ENST00000534205 1250 ntBASIC23.17■■□□□ 1.3
ACTN4O43707 KRT18P61-201ENST00000585825 1298 ntBASIC23.17■■□□□ 1.3
ACTN4O43707 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.17■■□□□ 1.3
ACTN4O43707 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ACTN4O43707 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
ACTN4O43707 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
ACTN4O43707 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
ACTN4O43707 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
ACTN4O43707 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ACTN4O43707 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
ACTN4O43707 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.16■■□□□ 1.3
ACTN4O43707 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ACTN4O43707 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
ACTN4O43707 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.16■■□□□ 1.3
ACTN4O43707 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.16■■□□□ 1.3
ACTN4O43707 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.16■■□□□ 1.3
ACTN4O43707 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ACTN4O43707 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.16■■□□□ 1.3
ACTN4O43707 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.16■■□□□ 1.3
ACTN4O43707 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ACTN4O43707 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ACTN4O43707 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ACTN4O43707 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ACTN4O43707 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.15■■□□□ 1.3
ACTN4O43707 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.15■■□□□ 1.3
ACTN4O43707 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.15■■□□□ 1.3
ACTN4O43707 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
ACTN4O43707 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
ACTN4O43707 AC245052.3-201ENST00000450182 901 ntBASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms