Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
SMAD6O43541 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD6O43541 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.97■□□□□ 0.95
SMAD6O43541 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.97■□□□□ 0.95
SMAD6O43541 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.97■□□□□ 0.95
SMAD6O43541 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.97■□□□□ 0.95
SMAD6O43541 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.97■□□□□ 0.95
SMAD6O43541 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.97■□□□□ 0.95
SMAD6O43541 AC026310.3-201ENST00000625186 2373 ntBASIC20.97■□□□□ 0.95
SMAD6O43541 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD6O43541 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.97■□□□□ 0.95
SMAD6O43541 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMAD6O43541 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD6O43541 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMAD6O43541 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD6O43541 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SMAD6O43541 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD6O43541 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SMAD6O43541 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD6O43541 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD6O43541 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD6O43541 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.96■□□□□ 0.95
SMAD6O43541 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.96■□□□□ 0.95
SMAD6O43541 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.96■□□□□ 0.95
SMAD6O43541 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.96■□□□□ 0.95
SMAD6O43541 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD6O43541 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD6O43541 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SMAD6O43541 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.96■□□□□ 0.95
SMAD6O43541 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD6O43541 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SMAD6O43541 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD6O43541 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD6O43541 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.95■□□□□ 0.94
SMAD6O43541 AC069152.1-201ENST00000438030 544 ntBASIC20.95■□□□□ 0.94
SMAD6O43541 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.95■□□□□ 0.94
SMAD6O43541 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SMAD6O43541 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD6O43541 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
SMAD6O43541 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD6O43541 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD6O43541 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMAD6O43541 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SMAD6O43541 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD6O43541 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.94■□□□□ 0.94
SMAD6O43541 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.94■□□□□ 0.94
SMAD6O43541 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.94■□□□□ 0.94
SMAD6O43541 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.94■□□□□ 0.94
SMAD6O43541 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD6O43541 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SMAD6O43541 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.94■□□□□ 0.94
SMAD6O43541 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.94■□□□□ 0.94
SMAD6O43541 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD6O43541 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.94■□□□□ 0.94
SMAD6O43541 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD6O43541 AL049796.1-201ENST00000565336 1766 ntBASIC20.93■□□□□ 0.94
SMAD6O43541 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.93■□□□□ 0.94
SMAD6O43541 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SMAD6O43541 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.93■□□□□ 0.94
SMAD6O43541 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD6O43541 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.93■□□□□ 0.94
SMAD6O43541 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SMAD6O43541 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.93■□□□□ 0.94
SMAD6O43541 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.93■□□□□ 0.94
SMAD6O43541 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SMAD6O43541 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.93■□□□□ 0.94
SMAD6O43541 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.93■□□□□ 0.94
SMAD6O43541 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.93■□□□□ 0.94
SMAD6O43541 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.93■□□□□ 0.94
SMAD6O43541 MIR4758-201ENST00000577688 71 ntBASIC20.93■□□□□ 0.94
SMAD6O43541 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD6O43541 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD6O43541 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD6O43541 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD6O43541 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD6O43541 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD6O43541 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.93■□□□□ 0.94
SMAD6O43541 KRT17P1-201ENST00000399211 1546 ntBASIC20.93■□□□□ 0.94
SMAD6O43541 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD6O43541 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SMAD6O43541 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.92■□□□□ 0.94
SMAD6O43541 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD6O43541 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SMAD6O43541 AC073210.2-201ENST00000430369 194 ntBASIC20.92■□□□□ 0.94
SMAD6O43541 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.92■□□□□ 0.94
SMAD6O43541 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
SMAD6O43541 AC092118.2-201ENST00000613495 667 ntBASIC20.92■□□□□ 0.94
SMAD6O43541 AC133041.1-202ENST00000642053 222 ntBASIC20.92■□□□□ 0.94
SMAD6O43541 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.92■□□□□ 0.94
SMAD6O43541 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD6O43541 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD6O43541 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD6O43541 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.92■□□□□ 0.94
SMAD6O43541 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.92■□□□□ 0.94
SMAD6O43541 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SMAD6O43541 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD6O43541 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD6O43541 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD6O43541 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD6O43541 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms