Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NKX2-8O15522 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.19■□□□□ 0.66
NKX2-8O15522 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NKX2-8O15522 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX2-8O15522 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-8O15522 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
NKX2-8O15522 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-8O15522 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-8O15522 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-8O15522 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NKX2-8O15522 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-8O15522 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-8O15522 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
NKX2-8O15522 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NKX2-8O15522 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-8O15522 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-8O15522 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NKX2-8O15522 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-8O15522 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.18■□□□□ 0.66
NKX2-8O15522 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NKX2-8O15522 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-8O15522 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-8O15522 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NKX2-8O15522 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-8O15522 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-8O15522 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.17■□□□□ 0.66
NKX2-8O15522 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-8O15522 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NKX2-8O15522 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-8O15522 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-8O15522 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NKX2-8O15522 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-8O15522 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-8O15522 C2orf69P4-201ENST00000565394 541 ntBASIC19.17■□□□□ 0.66
NKX2-8O15522 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-8O15522 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-8O15522 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-8O15522 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-8O15522 AC116050.2-201ENST00000612102 1779 ntBASIC19.16■□□□□ 0.66
NKX2-8O15522 AC127496.7-201ENST00000625110 1798 ntBASIC19.16■□□□□ 0.66
NKX2-8O15522 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.16■□□□□ 0.66
NKX2-8O15522 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX2-8O15522 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX2-8O15522 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX2-8O15522 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX2-8O15522 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX2-8O15522 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX2-8O15522 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-8O15522 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NKX2-8O15522 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NKX2-8O15522 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NKX2-8O15522 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.15■□□□□ 0.66
NKX2-8O15522 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 AL023875.1-201ENST00000640777 796 ntBASIC19.15■□□□□ 0.66
NKX2-8O15522 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.15■□□□□ 0.66
NKX2-8O15522 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NKX2-8O15522 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NKX2-8O15522 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.15■□□□□ 0.66
NKX2-8O15522 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-8O15522 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NKX2-8O15522 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-8O15522 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
NKX2-8O15522 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NKX2-8O15522 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-8O15522 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms