Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.81■■□□□ 1.56
FOXN1O15353 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC24.81■■□□□ 1.56
FOXN1O15353 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
FOXN1O15353 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.81■■□□□ 1.56
FOXN1O15353 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXN1O15353 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXN1O15353 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
FOXN1O15353 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
FOXN1O15353 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
FOXN1O15353 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
FOXN1O15353 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.8■■□□□ 1.56
FOXN1O15353 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
FOXN1O15353 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.8■■□□□ 1.56
FOXN1O15353 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
FOXN1O15353 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
FOXN1O15353 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
FOXN1O15353 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.8■■□□□ 1.56
FOXN1O15353 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
FOXN1O15353 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
FOXN1O15353 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
FOXN1O15353 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
FOXN1O15353 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
FOXN1O15353 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
FOXN1O15353 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
FOXN1O15353 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
FOXN1O15353 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
FOXN1O15353 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.79■■□□□ 1.56
FOXN1O15353 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
FOXN1O15353 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC24.79■■□□□ 1.56
FOXN1O15353 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
FOXN1O15353 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
FOXN1O15353 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
FOXN1O15353 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
FOXN1O15353 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
FOXN1O15353 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
FOXN1O15353 LSM12P1-201ENST00000411836 588 ntBASIC24.78■■□□□ 1.56
FOXN1O15353 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
FOXN1O15353 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.78■■□□□ 1.56
FOXN1O15353 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.78■■□□□ 1.56
FOXN1O15353 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
FOXN1O15353 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.78■■□□□ 1.56
FOXN1O15353 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
FOXN1O15353 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
FOXN1O15353 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
FOXN1O15353 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
FOXN1O15353 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
FOXN1O15353 TPM4P1-201ENST00000436100 807 ntBASIC24.77■■□□□ 1.56
FOXN1O15353 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.77■■□□□ 1.56
FOXN1O15353 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.77■■□□□ 1.56
FOXN1O15353 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC24.77■■□□□ 1.56
FOXN1O15353 HLA-B-256ENST00000639848 1089 ntBASIC24.77■■□□□ 1.56
FOXN1O15353 AL049637.2-201ENST00000641778 930 ntBASIC24.77■■□□□ 1.56
FOXN1O15353 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FOXN1O15353 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
FOXN1O15353 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.77■■□□□ 1.56
FOXN1O15353 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FOXN1O15353 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
FOXN1O15353 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.76■■□□□ 1.55
FOXN1O15353 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
FOXN1O15353 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
FOXN1O15353 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FOXN1O15353 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
FOXN1O15353 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.76■■□□□ 1.55
FOXN1O15353 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FOXN1O15353 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FOXN1O15353 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
FOXN1O15353 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.76■■□□□ 1.55
FOXN1O15353 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
FOXN1O15353 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC24.76■■□□□ 1.55
FOXN1O15353 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.76■■□□□ 1.55
FOXN1O15353 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.76■■□□□ 1.55
FOXN1O15353 MIR4785-201ENST00000585005 73 ntBASIC24.76■■□□□ 1.55
FOXN1O15353 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
FOXN1O15353 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
FOXN1O15353 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
FOXN1O15353 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
FOXN1O15353 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
FOXN1O15353 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FOXN1O15353 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FOXN1O15353 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
FOXN1O15353 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.75■■□□□ 1.55
FOXN1O15353 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.75■■□□□ 1.55
FOXN1O15353 AC069544.1-201ENST00000609399 999 ntBASIC24.75■■□□□ 1.55
FOXN1O15353 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FOXN1O15353 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
FOXN1O15353 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
FOXN1O15353 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.75■■□□□ 1.55
FOXN1O15353 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
FOXN1O15353 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
FOXN1O15353 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.74■■□□□ 1.55
FOXN1O15353 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
FOXN1O15353 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.74■■□□□ 1.55
FOXN1O15353 AL355075.4-201ENST00000554988 638 ntBASIC24.74■■□□□ 1.55
FOXN1O15353 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.74■■□□□ 1.55
FOXN1O15353 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.74■■□□□ 1.55
FOXN1O15353 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC24.74■■□□□ 1.55
FOXN1O15353 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
FOXN1O15353 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
FOXN1O15353 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
FOXN1O15353 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms