Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TO15178 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TO15178 FAM21FP-204ENST00000608637 956 ntBASIC19.07■□□□□ 0.64
TO15178 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.07■□□□□ 0.64
TO15178 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TO15178 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TO15178 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TO15178 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.07■□□□□ 0.64
TO15178 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TO15178 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.06■□□□□ 0.64
TO15178 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TO15178 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TO15178 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.06■□□□□ 0.64
TO15178 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TO15178 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
TO15178 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TO15178 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TO15178 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TO15178 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.06■□□□□ 0.64
TO15178 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TO15178 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
TO15178 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TO15178 AC005229.4-201ENST00000610085 2198 ntBASIC19.06■□□□□ 0.64
TO15178 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.06■□□□□ 0.64
TO15178 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 AC121338.2-201ENST00000622535 1744 ntBASIC19.05■□□□□ 0.64
TO15178 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TO15178 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 SLC25A24-204ENST00000569674 2357 ntBASIC19.05■□□□□ 0.64
TO15178 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.05■□□□□ 0.64
TO15178 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.05■□□□□ 0.64
TO15178 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.05■□□□□ 0.64
TO15178 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.05■□□□□ 0.64
TO15178 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.05■□□□□ 0.64
TO15178 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
TO15178 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TO15178 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TO15178 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TO15178 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.04■□□□□ 0.64
TO15178 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.04■□□□□ 0.64
TO15178 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TO15178 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TO15178 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.04■□□□□ 0.64
TO15178 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TO15178 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.04■□□□□ 0.64
TO15178 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.04■□□□□ 0.64
TO15178 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.04■□□□□ 0.64
TO15178 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.04■□□□□ 0.64
TO15178 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.04■□□□□ 0.64
TO15178 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TO15178 AC005181.1-201ENST00000604782 1256 ntBASIC19.04■□□□□ 0.64
TO15178 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.04■□□□□ 0.64
TO15178 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TO15178 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TO15178 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.04■□□□□ 0.64
TO15178 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.04■□□□□ 0.64
TO15178 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TO15178 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TO15178 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.03■□□□□ 0.64
TO15178 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TO15178 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TO15178 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TO15178 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.03■□□□□ 0.64
TO15178 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TO15178 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.03■□□□□ 0.64
TO15178 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.03■□□□□ 0.64
TO15178 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.03■□□□□ 0.64
TO15178 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TO15178 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TO15178 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
TO15178 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TO15178 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.03■□□□□ 0.64
TO15178 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TO15178 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TO15178 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TO15178 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TO15178 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TO15178 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TO15178 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TO15178 CYP2T1P-201ENST00000432607 1285 ntBASIC19.02■□□□□ 0.64
TO15178 RARRES2P4-201ENST00000514074 484 ntBASIC19.02■□□□□ 0.64
TO15178 AC016405.3-201ENST00000607710 860 ntBASIC19.02■□□□□ 0.64
TO15178 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.02■□□□□ 0.64
TO15178 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TO15178 RNF165-205ENST00000588679 2904 ntBASIC19.02■□□□□ 0.64
TO15178 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TO15178 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.63
TO15178 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.02■□□□□ 0.63
TO15178 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms