Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN9O14815 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN9O14815 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 AC080038.1-201ENST00000611274 1154 ntBASIC21.8■■□□□ 1.08
CAPN9O14815 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN9O14815 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN9O14815 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN9O14815 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.79■■□□□ 1.08
CAPN9O14815 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN9O14815 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CAPN9O14815 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN9O14815 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CAPN9O14815 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN9O14815 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPN9O14815 TERF1P5-201ENST00000477545 1207 ntBASIC21.79■■□□□ 1.08
CAPN9O14815 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
CAPN9O14815 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN9O14815 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CAPN9O14815 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.79■■□□□ 1.08
CAPN9O14815 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPN9O14815 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN9O14815 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CAPN9O14815 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.78■■□□□ 1.08
CAPN9O14815 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN9O14815 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.78■■□□□ 1.08
CAPN9O14815 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.78■■□□□ 1.08
CAPN9O14815 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.78■■□□□ 1.08
CAPN9O14815 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.78■■□□□ 1.08
CAPN9O14815 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.78■■□□□ 1.08
CAPN9O14815 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.78■■□□□ 1.08
CAPN9O14815 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN9O14815 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CAPN9O14815 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN9O14815 RBM17P2-201ENST00000616397 1405 ntBASIC21.78■■□□□ 1.08
CAPN9O14815 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN9O14815 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.78■■□□□ 1.08
CAPN9O14815 FEM1AP4-201ENST00000443167 1987 ntBASIC21.78■■□□□ 1.08
CAPN9O14815 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN9O14815 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN9O14815 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.77■■□□□ 1.08
CAPN9O14815 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CAPN9O14815 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.77■■□□□ 1.08
CAPN9O14815 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CAPN9O14815 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN9O14815 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.77■■□□□ 1.08
CAPN9O14815 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN9O14815 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN9O14815 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CAPN9O14815 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN9O14815 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CAPN9O14815 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN9O14815 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CAPN9O14815 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN9O14815 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.77■■□□□ 1.08
CAPN9O14815 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CAPN9O14815 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN9O14815 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CAPN9O14815 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN9O14815 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN9O14815 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN9O14815 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN9O14815 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN9O14815 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN9O14815 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.76■■□□□ 1.07
CAPN9O14815 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN9O14815 DUX4L16-201ENST00000555130 1264 ntBASIC21.76■■□□□ 1.07
CAPN9O14815 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.76■■□□□ 1.07
CAPN9O14815 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN9O14815 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN9O14815 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CAPN9O14815 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN9O14815 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CAPN9O14815 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN9O14815 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN9O14815 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN9O14815 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN9O14815 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.75■■□□□ 1.07
CAPN9O14815 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN9O14815 AC243732.1-201ENST00000612648 864 ntBASIC21.75■■□□□ 1.07
CAPN9O14815 AC013268.1-206ENST00000638368 961 ntBASIC21.75■■□□□ 1.07
CAPN9O14815 AC112229.1-201ENST00000639295 961 ntBASIC21.75■■□□□ 1.07
CAPN9O14815 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.75■■□□□ 1.07
CAPN9O14815 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN9O14815 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CAPN9O14815 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CAPN9O14815 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN9O14815 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
CAPN9O14815 AF106564.1-201ENST00000607058 2553 ntBASIC21.74■■□□□ 1.07
CAPN9O14815 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.74■■□□□ 1.07
CAPN9O14815 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.74■■□□□ 1.07
CAPN9O14815 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN9O14815 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.74■■□□□ 1.07
CAPN9O14815 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CAPN9O14815 AC231657.2-201ENST00000624556 255 ntBASIC21.74■■□□□ 1.07
CAPN9O14815 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN9O14815 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms