Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBFD1O14562 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
UBFD1O14562 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBFD1O14562 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBFD1O14562 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBFD1O14562 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.08■□□□□ 0.81
UBFD1O14562 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBFD1O14562 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.08■□□□□ 0.81
UBFD1O14562 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.08■□□□□ 0.81
UBFD1O14562 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.08■□□□□ 0.81
UBFD1O14562 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
UBFD1O14562 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBFD1O14562 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.08■□□□□ 0.8
UBFD1O14562 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBFD1O14562 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBFD1O14562 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBFD1O14562 AL121603.2-201ENST00000557373 2117 ntBASIC20.08■□□□□ 0.8
UBFD1O14562 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBFD1O14562 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
UBFD1O14562 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.07■□□□□ 0.8
UBFD1O14562 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.07■□□□□ 0.8
UBFD1O14562 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.07■□□□□ 0.8
UBFD1O14562 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.07■□□□□ 0.8
UBFD1O14562 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
UBFD1O14562 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.07■□□□□ 0.8
UBFD1O14562 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
UBFD1O14562 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBFD1O14562 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.06■□□□□ 0.8
UBFD1O14562 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.06■□□□□ 0.8
UBFD1O14562 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
UBFD1O14562 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.06■□□□□ 0.8
UBFD1O14562 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.06■□□□□ 0.8
UBFD1O14562 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.06■□□□□ 0.8
UBFD1O14562 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.06■□□□□ 0.8
UBFD1O14562 AL139246.5-201ENST00000606645 996 ntBASIC20.06■□□□□ 0.8
UBFD1O14562 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
UBFD1O14562 AL358852.1-201ENST00000623174 1268 ntBASIC20.06■□□□□ 0.8
UBFD1O14562 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBFD1O14562 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.05■□□□□ 0.8
UBFD1O14562 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
UBFD1O14562 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 RARRES2P11-201ENST00000635158 484 ntBASIC20.05■□□□□ 0.8
UBFD1O14562 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.05■□□□□ 0.8
UBFD1O14562 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
UBFD1O14562 KRT87P-202ENST00000534226 1464 ntBASIC20.05■□□□□ 0.8
UBFD1O14562 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBFD1O14562 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBFD1O14562 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.04■□□□□ 0.8
UBFD1O14562 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBFD1O14562 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBFD1O14562 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
UBFD1O14562 AC079140.4-201ENST00000507448 529 ntBASIC20.04■□□□□ 0.8
UBFD1O14562 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.04■□□□□ 0.8
UBFD1O14562 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBFD1O14562 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBFD1O14562 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
UBFD1O14562 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBFD1O14562 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBFD1O14562 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.03■□□□□ 0.8
UBFD1O14562 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.03■□□□□ 0.8
UBFD1O14562 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.03■□□□□ 0.8
UBFD1O14562 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 POU5F1P4-201ENST00000413175 1085 ntBASIC20.03■□□□□ 0.8
UBFD1O14562 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.03■□□□□ 0.8
UBFD1O14562 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms