Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.76■■□□□ 1.87
CHL1O00533 KRT17P1-201ENST00000399211 1546 ntBASIC26.75■■□□□ 1.87
CHL1O00533 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CHL1O00533 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CHL1O00533 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHL1O00533 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHL1O00533 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.75■■□□□ 1.87
CHL1O00533 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.75■■□□□ 1.87
CHL1O00533 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.75■■□□□ 1.87
CHL1O00533 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHL1O00533 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHL1O00533 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CHL1O00533 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.74■■□□□ 1.87
CHL1O00533 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHL1O00533 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.74■■□□□ 1.87
CHL1O00533 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.74■■□□□ 1.87
CHL1O00533 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CHL1O00533 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHL1O00533 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.74■■□□□ 1.87
CHL1O00533 MCRIP2P1-201ENST00000394346 511 ntBASIC26.74■■□□□ 1.87
CHL1O00533 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.74■■□□□ 1.87
CHL1O00533 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CHL1O00533 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.74■■□□□ 1.87
CHL1O00533 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.74■■□□□ 1.87
CHL1O00533 MYC-209ENST00000641252 345 ntBASIC26.74■■□□□ 1.87
CHL1O00533 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHL1O00533 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHL1O00533 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CHL1O00533 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHL1O00533 CYP21A1P-202ENST00000354927 1481 ntBASIC26.74■■□□□ 1.87
CHL1O00533 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.73■■□□□ 1.87
CHL1O00533 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHL1O00533 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CHL1O00533 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.73■■□□□ 1.87
CHL1O00533 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.73■■□□□ 1.87
CHL1O00533 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHL1O00533 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CHL1O00533 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHL1O00533 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.73■■□□□ 1.87
CHL1O00533 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.73■■□□□ 1.87
CHL1O00533 AC011484.1-201ENST00000377652 1995 ntBASIC26.73■■□□□ 1.87
CHL1O00533 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.72■■□□□ 1.87
CHL1O00533 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHL1O00533 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CHL1O00533 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.72■■□□□ 1.87
CHL1O00533 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHL1O00533 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHL1O00533 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.72■■□□□ 1.87
CHL1O00533 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.71■■□□□ 1.87
CHL1O00533 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHL1O00533 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.71■■□□□ 1.87
CHL1O00533 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHL1O00533 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CHL1O00533 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHL1O00533 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHL1O00533 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHL1O00533 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.71■■□□□ 1.87
CHL1O00533 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.71■■□□□ 1.87
CHL1O00533 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CHL1O00533 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CHL1O00533 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHL1O00533 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.71■■□□□ 1.87
CHL1O00533 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.71■■□□□ 1.87
CHL1O00533 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
CHL1O00533 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CHL1O00533 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CHL1O00533 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CHL1O00533 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.7■■□□□ 1.86
CHL1O00533 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.7■■□□□ 1.86
CHL1O00533 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.7■■□□□ 1.86
CHL1O00533 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.7■■□□□ 1.86
CHL1O00533 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
CHL1O00533 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHL1O00533 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHL1O00533 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHL1O00533 AF106564.1-201ENST00000607058 2553 ntBASIC26.69■■□□□ 1.86
CHL1O00533 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHL1O00533 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.69■■□□□ 1.86
CHL1O00533 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
CHL1O00533 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHL1O00533 KRT18P68-201ENST00000392293 1000 ntBASIC26.69■■□□□ 1.86
CHL1O00533 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
CHL1O00533 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.69■■□□□ 1.86
CHL1O00533 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.69■■□□□ 1.86
CHL1O00533 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.69■■□□□ 1.86
CHL1O00533 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHL1O00533 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHL1O00533 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHL1O00533 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
CHL1O00533 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CHL1O00533 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHL1O00533 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHL1O00533 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CHL1O00533 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.69■■□□□ 1.86
CHL1O00533 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.69■■□□□ 1.86
CHL1O00533 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.68■■□□□ 1.86
CHL1O00533 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHL1O00533 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.68■■□□□ 1.86
CHL1O00533 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHL1O00533 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms