Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.72■□□□□ 0.75
RTCAO00442 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.72■□□□□ 0.75
RTCAO00442 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.72■□□□□ 0.75
RTCAO00442 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTCAO00442 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
RTCAO00442 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RTCAO00442 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RTCAO00442 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 RBM17P2-201ENST00000616397 1405 ntBASIC19.71■□□□□ 0.75
RTCAO00442 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.71■□□□□ 0.75
RTCAO00442 AC016769.1-201ENST00000409132 1010 ntBASIC19.71■□□□□ 0.75
RTCAO00442 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.71■□□□□ 0.75
RTCAO00442 SLC7A5P1-201ENST00000568957 537 ntBASIC19.71■□□□□ 0.75
RTCAO00442 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RTCAO00442 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RTCAO00442 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.71■□□□□ 0.75
RTCAO00442 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 AC006128.1-201ENST00000624704 1661 ntBASIC19.71■□□□□ 0.75
RTCAO00442 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.71■□□□□ 0.75
RTCAO00442 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.71■□□□□ 0.75
RTCAO00442 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RTCAO00442 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTCAO00442 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.7■□□□□ 0.74
RTCAO00442 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
RTCAO00442 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.7■□□□□ 0.74
RTCAO00442 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTCAO00442 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTCAO00442 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTCAO00442 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.7■□□□□ 0.74
RTCAO00442 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTCAO00442 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTCAO00442 AC022517.1-201ENST00000592429 346 ntBASIC19.7■□□□□ 0.74
RTCAO00442 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.7■□□□□ 0.74
RTCAO00442 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.7■□□□□ 0.74
RTCAO00442 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTCAO00442 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTCAO00442 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTCAO00442 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTCAO00442 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.7■□□□□ 0.74
RTCAO00442 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTCAO00442 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.7■□□□□ 0.74
RTCAO00442 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.7■□□□□ 0.74
RTCAO00442 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RTCAO00442 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RTCAO00442 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.69■□□□□ 0.74
RTCAO00442 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
RTCAO00442 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RTCAO00442 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.69■□□□□ 0.74
RTCAO00442 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.69■□□□□ 0.74
RTCAO00442 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.69■□□□□ 0.74
RTCAO00442 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.69■□□□□ 0.74
RTCAO00442 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RTCAO00442 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RTCAO00442 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTCAO00442 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RTCAO00442 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.68■□□□□ 0.74
RTCAO00442 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.68■□□□□ 0.74
RTCAO00442 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RTCAO00442 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.68■□□□□ 0.74
RTCAO00442 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTCAO00442 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms