Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A1O00337 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A1O00337 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SLC28A1O00337 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A1O00337 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC28A1O00337 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A1O00337 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC28A1O00337 FP700111.2-201ENST00000619190 1892 ntBASIC19.9■□□□□ 0.78
SLC28A1O00337 AC020907.5-201ENST00000624372 1936 ntBASIC19.9■□□□□ 0.78
SLC28A1O00337 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SLC28A1O00337 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SLC28A1O00337 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
SLC28A1O00337 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A1O00337 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC28A1O00337 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC28A1O00337 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC28A1O00337 IRS3P-201ENST00000223076 1006 ntBASIC19.89■□□□□ 0.77
SLC28A1O00337 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC28A1O00337 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
SLC28A1O00337 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC28A1O00337 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC28A1O00337 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
SLC28A1O00337 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC28A1O00337 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC28A1O00337 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SLC28A1O00337 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A1O00337 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A1O00337 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC28A1O00337 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A1O00337 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A1O00337 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A1O00337 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A1O00337 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SLC28A1O00337 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A1O00337 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC28A1O00337 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
SLC28A1O00337 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.88■□□□□ 0.77
SLC28A1O00337 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.88■□□□□ 0.77
SLC28A1O00337 AC138907.5-202ENST00000569484 235 ntBASIC19.88■□□□□ 0.77
SLC28A1O00337 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A1O00337 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A1O00337 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SLC28A1O00337 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SLC28A1O00337 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A1O00337 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A1O00337 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A1O00337 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
SLC28A1O00337 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC28A1O00337 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC28A1O00337 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.87■□□□□ 0.77
SLC28A1O00337 AC120498.10-201ENST00000621827 505 ntBASIC19.87■□□□□ 0.77
SLC28A1O00337 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A1O00337 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A1O00337 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A1O00337 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A1O00337 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A1O00337 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC28A1O00337 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC28A1O00337 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A1O00337 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A1O00337 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A1O00337 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC28A1O00337 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SLC28A1O00337 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A1O00337 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A1O00337 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC28A1O00337 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A1O00337 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC28A1O00337 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SLC28A1O00337 AC005837.3-201ENST00000612163 286 ntBASIC19.86■□□□□ 0.77
SLC28A1O00337 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A1O00337 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A1O00337 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A1O00337 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A1O00337 KRT16P2-201ENST00000414673 1423 ntBASIC19.85■□□□□ 0.77
SLC28A1O00337 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC28A1O00337 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
SLC28A1O00337 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A1O00337 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC28A1O00337 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A1O00337 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A1O00337 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A1O00337 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A1O00337 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SLC28A1O00337 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A1O00337 AC027612.3-201ENST00000413684 1047 ntBASIC19.85■□□□□ 0.77
SLC28A1O00337 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A1O00337 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC28A1O00337 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A1O00337 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A1O00337 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SLC28A1O00337 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC28A1O00337 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SLC28A1O00337 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC28A1O00337 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SLC28A1O00337 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SLC28A1O00337 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC28A1O00337 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC28A1O00337 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
SLC28A1O00337 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms