Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TLR4O00206 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TLR4O00206 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.52■□□□□ 0.88
TLR4O00206 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.52■□□□□ 0.88
TLR4O00206 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR4O00206 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR4O00206 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.52■□□□□ 0.88
TLR4O00206 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.52■□□□□ 0.88
TLR4O00206 AC098590.1-201ENST00000468126 897 ntBASIC20.52■□□□□ 0.88
TLR4O00206 RPS2P52-201ENST00000469610 820 ntBASIC20.52■□□□□ 0.88
TLR4O00206 UNC93B5-201ENST00000530315 699 ntBASIC20.52■□□□□ 0.88
TLR4O00206 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TLR4O00206 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TLR4O00206 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TLR4O00206 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.52■□□□□ 0.87
TLR4O00206 FAM99A-202ENST00000538190 1989 ntBASIC20.52■□□□□ 0.87
TLR4O00206 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.51■□□□□ 0.87
TLR4O00206 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR4O00206 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TLR4O00206 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR4O00206 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TLR4O00206 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.51■□□□□ 0.87
TLR4O00206 AC128676.1-201ENST00000454392 318 ntBASIC20.51■□□□□ 0.87
TLR4O00206 AC026366.1-201ENST00000488803 879 ntBASIC20.51■□□□□ 0.87
TLR4O00206 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TLR4O00206 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.51■□□□□ 0.87
TLR4O00206 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR4O00206 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TLR4O00206 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TLR4O00206 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.51■□□□□ 0.87
TLR4O00206 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR4O00206 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TLR4O00206 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR4O00206 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.5■□□□□ 0.87
TLR4O00206 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TLR4O00206 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TLR4O00206 GCSHP5-201ENST00000443090 522 ntBASIC20.5■□□□□ 0.87
TLR4O00206 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.5■□□□□ 0.87
TLR4O00206 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.5■□□□□ 0.87
TLR4O00206 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TLR4O00206 AP006294.2-201ENST00000641667 209 ntBASIC20.5■□□□□ 0.87
TLR4O00206 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR4O00206 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR4O00206 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TLR4O00206 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.5■□□□□ 0.87
TLR4O00206 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.5■□□□□ 0.87
TLR4O00206 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.5■□□□□ 0.87
TLR4O00206 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TLR4O00206 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.5■□□□□ 0.87
TLR4O00206 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TLR4O00206 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.49■□□□□ 0.87
TLR4O00206 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TLR4O00206 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TLR4O00206 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TLR4O00206 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
TLR4O00206 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TLR4O00206 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TLR4O00206 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.49■□□□□ 0.87
TLR4O00206 MCRIP2P1-201ENST00000394346 511 ntBASIC20.49■□□□□ 0.87
TLR4O00206 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.49■□□□□ 0.87
TLR4O00206 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.49■□□□□ 0.87
TLR4O00206 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.49■□□□□ 0.87
TLR4O00206 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TLR4O00206 AL589743.5-201ENST00000616611 1050 ntBASIC20.49■□□□□ 0.87
TLR4O00206 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.49■□□□□ 0.87
TLR4O00206 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
TLR4O00206 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TLR4O00206 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TLR4O00206 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TLR4O00206 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.49■□□□□ 0.87
TLR4O00206 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR4O00206 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TLR4O00206 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TLR4O00206 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.48■□□□□ 0.87
TLR4O00206 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TLR4O00206 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR4O00206 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TLR4O00206 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TLR4O00206 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.48■□□□□ 0.87
TLR4O00206 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TLR4O00206 AP003097.1-201ENST00000530657 1135 ntBASIC20.48■□□□□ 0.87
TLR4O00206 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.48■□□□□ 0.87
TLR4O00206 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TLR4O00206 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TLR4O00206 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.48■□□□□ 0.87
TLR4O00206 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TLR4O00206 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TLR4O00206 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR4O00206 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
TLR4O00206 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR4O00206 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.47■□□□□ 0.87
TLR4O00206 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR4O00206 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR4O00206 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TLR4O00206 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TLR4O00206 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TLR4O00206 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TLR4O00206 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.47■□□□□ 0.87
TLR4O00206 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TLR4O00206 AC242852.2-201ENST00000615738 1807 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms