Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.27■□□□□ 0.83
TMX2-CTNND1H3BSU7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMX2-CTNND1H3BSU7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMX2-CTNND1H3BSU7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMX2-CTNND1H3BSU7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
TMX2-CTNND1H3BSU7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 RNA5SP413-201ENST00000516373 109 ntBASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 AL591742.1-201ENST00000604433 565 ntBASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 ITM2C-210ENST00000620962 501 ntBASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TMX2-CTNND1H3BSU7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 AL157384.1-201ENST00000445995 2473 ntBASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 KRT18P29-201ENST00000397031 1267 ntBASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 AC097658.1-201ENST00000475555 843 ntBASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 AC092053.2-201ENST00000640557 1818 ntBASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMX2-CTNND1H3BSU7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 AC098934.4-201ENST00000564127 592 ntBASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 AC080038.3-201ENST00000623346 1952 ntBASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMX2-CTNND1H3BSU7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 BX276092.2-201ENST00000417668 665 ntBASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 AC016405.3-201ENST00000607710 860 ntBASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 AC243732.1-201ENST00000612648 864 ntBASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMX2-CTNND1H3BSU7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.22■□□□□ 0.83
TMX2-CTNND1H3BSU7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms