Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3BM21 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H3BM21 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3BM21 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
H3BM21 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
H3BM21 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3BM21 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H3BM21 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H3BM21 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.6■□□□□ 0.89
H3BM21 Z98882.1-201ENST00000622160 2253 ntBASIC20.6■□□□□ 0.89
H3BM21 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H3BM21 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
H3BM21 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.6■□□□□ 0.89
H3BM21 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H3BM21 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.6■□□□□ 0.89
H3BM21 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.6■□□□□ 0.89
H3BM21 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.6■□□□□ 0.89
H3BM21 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
H3BM21 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H3BM21 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H3BM21 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.6■□□□□ 0.89
H3BM21 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
H3BM21 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
H3BM21 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H3BM21 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.59■□□□□ 0.89
H3BM21 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.59■□□□□ 0.89
H3BM21 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3BM21 BX276092.2-201ENST00000417668 665 ntBASIC20.59■□□□□ 0.89
H3BM21 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.59■□□□□ 0.89
H3BM21 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.59■□□□□ 0.89
H3BM21 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H3BM21 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
H3BM21 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3BM21 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3BM21 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3BM21 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H3BM21 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H3BM21 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
H3BM21 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H3BM21 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
H3BM21 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
H3BM21 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
H3BM21 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H3BM21 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.58■□□□□ 0.89
H3BM21 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H3BM21 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.58■□□□□ 0.89
H3BM21 RARRES2P4-201ENST00000514074 484 ntBASIC20.58■□□□□ 0.89
H3BM21 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.58■□□□□ 0.89
H3BM21 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.58■□□□□ 0.89
H3BM21 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.58■□□□□ 0.89
H3BM21 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
H3BM21 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.58■□□□□ 0.88
H3BM21 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.58■□□□□ 0.88
H3BM21 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
H3BM21 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
H3BM21 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3BM21 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.57■□□□□ 0.88
H3BM21 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.57■□□□□ 0.88
H3BM21 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3BM21 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.57■□□□□ 0.88
H3BM21 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3BM21 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3BM21 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
H3BM21 AC245052.3-201ENST00000450182 901 ntBASIC20.57■□□□□ 0.88
H3BM21 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.57■□□□□ 0.88
H3BM21 RNA5SP413-201ENST00000516373 109 ntBASIC20.57■□□□□ 0.88
H3BM21 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H3BM21 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H3BM21 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H3BM21 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3BM21 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
H3BM21 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.57■□□□□ 0.88
H3BM21 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3BM21 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H3BM21 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H3BM21 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H3BM21 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
H3BM21 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
H3BM21 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.56■□□□□ 0.88
H3BM21 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.56■□□□□ 0.88
H3BM21 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H3BM21 MIR4651-201ENST00000582622 73 ntBASIC20.56■□□□□ 0.88
H3BM21 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H3BM21 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
H3BM21 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H3BM21 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
H3BM21 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H3BM21 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
H3BM21 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
H3BM21 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
H3BM21 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
H3BM21 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H3BM21 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
H3BM21 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
H3BM21 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.55■□□□□ 0.88
H3BM21 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.55■□□□□ 0.88
H3BM21 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.55■□□□□ 0.88
H3BM21 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H3BM21 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H3BM21 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms