Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCA1A8K7I4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.28■□□□□ 0.68
CLCA1A8K7I4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCA1A8K7I4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCA1A8K7I4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCA1A8K7I4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.28■□□□□ 0.68
CLCA1A8K7I4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLCA1A8K7I4 AC004854.2-201ENST00000608450 1441 ntBASIC19.27■□□□□ 0.68
CLCA1A8K7I4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCA1A8K7I4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.27■□□□□ 0.68
CLCA1A8K7I4 AC004911.1-201ENST00000416316 871 ntBASIC19.27■□□□□ 0.68
CLCA1A8K7I4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCA1A8K7I4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CLCA1A8K7I4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCA1A8K7I4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCA1A8K7I4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCA1A8K7I4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CLCA1A8K7I4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 AP004607.4-201ENST00000530158 1459 ntBASIC19.26■□□□□ 0.67
CLCA1A8K7I4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA1A8K7I4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 AP004607.7-201ENST00000527152 1677 ntBASIC19.25■□□□□ 0.67
CLCA1A8K7I4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCA1A8K7I4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.24■□□□□ 0.67
CLCA1A8K7I4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCA1A8K7I4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA1A8K7I4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA1A8K7I4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms