Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.64■□□□□ 0.25
SRRM4A7MD48 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.64■□□□□ 0.25
SRRM4A7MD48 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.64■□□□□ 0.25
SRRM4A7MD48 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM4A7MD48 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 KRT16P2-201ENST00000414673 1423 ntBASIC16.63■□□□□ 0.25
SRRM4A7MD48 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 DUX4L2-201ENST00000561772 1275 ntBASIC16.63■□□□□ 0.25
SRRM4A7MD48 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 AP001160.3-201ENST00000601484 763 ntBASIC16.63■□□□□ 0.25
SRRM4A7MD48 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 DUX4L6-201ENST00000626483 1275 ntBASIC16.63■□□□□ 0.25
SRRM4A7MD48 DUX4L1-201ENST00000627662 1275 ntBASIC16.63■□□□□ 0.25
SRRM4A7MD48 DUX4L8-201ENST00000629013 1275 ntBASIC16.63■□□□□ 0.25
SRRM4A7MD48 DUX4L3-201ENST00000630187 1275 ntBASIC16.63■□□□□ 0.25
SRRM4A7MD48 DUX4L7-201ENST00000630678 1275 ntBASIC16.63■□□□□ 0.25
SRRM4A7MD48 DUX4L5-201ENST00000630834 1275 ntBASIC16.63■□□□□ 0.25
SRRM4A7MD48 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM4A7MD48 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SRRM4A7MD48 FP700111.2-201ENST00000619190 1892 ntBASIC16.63■□□□□ 0.25
SRRM4A7MD48 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM4A7MD48 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 AC004854.2-201ENST00000608450 1441 ntBASIC16.62■□□□□ 0.25
SRRM4A7MD48 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM4A7MD48 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 AC027702.1-201ENST00000563810 1770 ntBASIC16.62■□□□□ 0.25
SRRM4A7MD48 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM4A7MD48 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM4A7MD48 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM4A7MD48 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM4A7MD48 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM4A7MD48 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM4A7MD48 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM4A7MD48 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM4A7MD48 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.62■□□□□ 0.25
SRRM4A7MD48 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM4A7MD48 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SRRM4A7MD48 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SRRM4A7MD48 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM4A7MD48 GABARAPL3-202ENST00000624044 1851 ntBASIC16.61■□□□□ 0.25
SRRM4A7MD48 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.61■□□□□ 0.25
SRRM4A7MD48 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.61■□□□□ 0.25
SRRM4A7MD48 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM4A7MD48 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.61■□□□□ 0.25
SRRM4A7MD48 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM4A7MD48 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM4A7MD48 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms