Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 FP700111.2-201ENST00000619190 1892 ntBASIC21.12■□□□□ 0.97
SMIM23A6NLE4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 RARRES2P1-201ENST00000474487 481 ntBASIC21.11■□□□□ 0.97
SMIM23A6NLE4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.11■□□□□ 0.97
SMIM23A6NLE4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 KRT16P3-201ENST00000439127 1283 ntBASIC21.1■□□□□ 0.97
SMIM23A6NLE4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.1■□□□□ 0.97
SMIM23A6NLE4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.09■□□□□ 0.97
SMIM23A6NLE4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM23A6NLE4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SMIM23A6NLE4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SMIM23A6NLE4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM23A6NLE4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SMIM23A6NLE4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.08■□□□□ 0.97
SMIM23A6NLE4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM23A6NLE4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM23A6NLE4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
SMIM23A6NLE4 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.08■□□□□ 0.97
SMIM23A6NLE4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.08■□□□□ 0.97
SMIM23A6NLE4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.08■□□□□ 0.96
SMIM23A6NLE4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMIM23A6NLE4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMIM23A6NLE4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMIM23A6NLE4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SMIM23A6NLE4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SMIM23A6NLE4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SMIM23A6NLE4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMIM23A6NLE4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms