Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC189A1A4V9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC189A1A4V9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 AC012414.1-201ENST00000556676 535 ntBASIC20.62■□□□□ 0.89
CCDC189A1A4V9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC189A1A4V9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.61■□□□□ 0.89
CCDC189A1A4V9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC189A1A4V9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 AC110285.6-201ENST00000617652 491 ntBASIC20.6■□□□□ 0.89
CCDC189A1A4V9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 AL136967.2-201ENST00000623968 743 ntBASIC20.6■□□□□ 0.89
CCDC189A1A4V9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC189A1A4V9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 AF213884.3-201ENST00000563833 479 ntBASIC20.59■□□□□ 0.89
CCDC189A1A4V9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 AL031432.3-201ENST00000607698 485 ntBASIC20.59■□□□□ 0.89
CCDC189A1A4V9 AL354811.1-201ENST00000610286 706 ntBASIC20.59■□□□□ 0.89
CCDC189A1A4V9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC189A1A4V9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms