Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 AC123595.1-201ENST00000440769 1046 ntBASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRAV4A0A0B4J268 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 AC138907.5-202ENST00000569484 235 ntBASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 AC120498.10-201ENST00000621827 505 ntBASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV4A0A0B4J268 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 YBX1P1-201ENST00000445822 960 ntBASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 AC061975.6-201ENST00000579045 1553 ntBASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 AC138932.1-201ENST00000534164 6830 ntBASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV4A0A0B4J268 AC121338.2-201ENST00000622535 1744 ntBASIC14.83□□□□□ -0.03
TRAV4A0A0B4J268 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV4A0A0B4J268 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV4A0A0B4J268 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 AC006128.1-201ENST00000624704 1661 ntBASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV4A0A0B4J268 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms