Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV18A0A075B6X5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV18A0A075B6X5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 AC099778.1-201ENST00000568593 1911 ntBASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 AC092171.4-201ENST00000609130 632 ntBASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAV18A0A075B6X5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 AP005435.1-201ENST00000529293 1178 ntBASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV18A0A075B6X5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 AL356740.2-201ENST00000601559 647 ntBASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms