Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 AL162377.1-201ENST00000618844 1793 ntBASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGKV2-28A0A075B6P5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
IGKV2-28A0A075B6P5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 AC099791.2-201ENST00000605725 427 ntBASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 AL512408.1-201ENST00000569378 2000 ntBASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 AC018445.3-201ENST00000624177 1945 ntBASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGKV2-28A0A075B6P5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 AC007225.1-201ENST00000566331 1836 ntBASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 AL356740.2-201ENST00000601559 647 ntBASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.63□□□□□ -0.23
IGKV2-28A0A075B6P5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGKV2-28A0A075B6P5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms