Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SLC1A1P43005 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC10.12□□□□□ -0.79
SLC1A1P43005 SEC61A2-204ENST00000379020 2252 ntTSL 5 BASIC10.12□□□□□ -0.79
SLC1A1P43005 AC124798.1-201ENST00000568280 2883 ntBASIC10.12□□□□□ -0.79
SLC1A1P43005 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC10.11□□□□□ -0.79
SLC1A1P43005 SMIM19-204ENST00000438528 2958 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 LINC01539-201ENST00000587904 2068 ntTSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 COL6A4P1-201ENST00000446690 2336 ntTSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SLC1A1P43005 SPATA46-201ENST00000367935 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 AC092132.2-201ENST00000611227 2744 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 TTLL5-201ENST00000286650 1595 ntTSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC10.11□□□□□ -0.79
SLC1A1P43005 AC092645.1-201ENST00000624058 2272 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 GHRH-201ENST00000237527 461 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 S100P-201ENST00000296370 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 FAM104B-201ENST00000332132 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 CLRN3-201ENST00000368671 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 C5orf56-202ENST00000378947 621 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 TRAV2-201ENST00000390424 348 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
SLC1A1P43005 OR8B1P-201ENST00000419328 918 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 AC005013.1-201ENST00000436594 588 ntTSL 4 BASIC10.11□□□□□ -0.79
SLC1A1P43005 CFL1P3-201ENST00000440942 490 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 ZFYVE9P2-201ENST00000447321 604 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC10.11□□□□□ -0.79
SLC1A1P43005 RN7SL380P-201ENST00000461702 308 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 RNA5-8SP6-201ENST00000515896 152 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC10.11□□□□□ -0.79
SLC1A1P43005 AL079352.1-201ENST00000547237 1042 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 ZMYND19P1-201ENST00000554267 787 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 AC092114.1-201ENST00000567227 532 ntTSL 4 BASIC10.11□□□□□ -0.79
SLC1A1P43005 SOX9-AS1-215ENST00000588177 465 ntTSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 LYPD8-202ENST00000590317 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 TP53TG1_1.1-201ENST00000612852 152 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 AL354809.1-202ENST00000614005 640 ntTSL 3 BASIC10.11□□□□□ -0.79
SLC1A1P43005 AL354809.1-201ENST00000618106 716 ntTSL 3 BASIC10.11□□□□□ -0.79
SLC1A1P43005 AC005578.1-201ENST00000622962 1020 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 C6orf203-204ENST00000625458 1146 ntTSL 3 BASIC10.11□□□□□ -0.79
SLC1A1P43005 AC012507.4-201ENST00000637275 504 ntTSL 3 BASIC10.11□□□□□ -0.79
SLC1A1P43005 LINC02452-201ENST00000637833 2982 ntTSL 5 BASIC10.11□□□□□ -0.79
SLC1A1P43005 AL034417.3-201ENST00000641100 1043 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 AC005524.1-201ENST00000636857 1674 ntBASIC10.11□□□□□ -0.79
SLC1A1P43005 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 OPTN-205ENST00000378757 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SLC1A1P43005 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SLC1A1P43005 GRIA2-211ENST00000507898 3041 ntTSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 CACNB2-202ENST00000324631 3446 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 MTHFD2P1-203ENST00000494840 2595 ntTSL 2 BASIC10.11□□□□□ -0.79
SLC1A1P43005 TMEM45B-202ENST00000524567 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 MEF2C-203ENST00000437473 4340 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SLC1A1P43005 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC10.1□□□□□ -0.79
SLC1A1P43005 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SLC1A1P43005 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SLC1A1P43005 MAGEB4-201ENST00000378982 2142 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SLC1A1P43005 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SLC1A1P43005 ATP1B2-201ENST00000250111 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SLC1A1P43005 NANOGP1-202ENST00000607111 1982 ntTSL 5 BASIC10.1□□□□□ -0.79
SLC1A1P43005 AC005307.1-201ENST00000567877 1570 ntTSL 3 BASIC10.1□□□□□ -0.79
SLC1A1P43005 CD59-213ENST00000533403 1847 ntTSL 3 BASIC10.1□□□□□ -0.79
SLC1A1P43005 AP001324.3-201ENST00000624759 1428 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 TFDP3-201ENST00000310125 1680 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SLC1A1P43005 ATAD1-201ENST00000308448 4640 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SLC1A1P43005 AL356961.1-201ENST00000567967 1923 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 ZWILCH-201ENST00000307897 3960 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SLC1A1P43005 PABPC1P12-201ENST00000428454 2175 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SLC1A1P43005 KARS-202ENST00000319410 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SLC1A1P43005 VPS50-201ENST00000251739 1193 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SLC1A1P43005 PPP1R32-202ENST00000366212 488 ntTSL 2 BASIC10.1□□□□□ -0.79
SLC1A1P43005 PRRG3-202ENST00000370354 650 ntTSL 3 BASIC10.1□□□□□ -0.79
SLC1A1P43005 PRR13-201ENST00000379786 927 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SLC1A1P43005 TRBV6-5-201ENST00000390368 410 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SLC1A1P43005 MIR885-201ENST00000401316 74 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 ATP5G3-203ENST00000409194 795 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SLC1A1P43005 AL136366.1-201ENST00000416996 964 ntTSL 2 BASIC10.1□□□□□ -0.79
SLC1A1P43005 GAPDHP64-201ENST00000419696 1003 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 LINC02028-201ENST00000420947 528 ntTSL 3 BASIC10.1□□□□□ -0.79
SLC1A1P43005 AC103563.3-201ENST00000428055 354 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SLC1A1P43005 SNX18P7-201ENST00000454116 635 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC10.1□□□□□ -0.79
SLC1A1P43005 PPIAP16-201ENST00000462517 487 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC10.1□□□□□ -0.79
SLC1A1P43005 MOK-223ENST00000522534 796 ntTSL 3 BASIC10.1□□□□□ -0.79
SLC1A1P43005 KRT127P-201ENST00000547183 433 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 RNASE1-205ENST00000555698 655 ntTSL 3 BASIC10.1□□□□□ -0.79
SLC1A1P43005 AC105109.1-201ENST00000556012 1115 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 PCSK6-AS1-201ENST00000558696 639 ntTSL 3 BASIC10.1□□□□□ -0.79
SLC1A1P43005 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC10.1□□□□□ -0.79
SLC1A1P43005 AC017100.1-201ENST00000565978 1169 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 AL390728.6-201ENST00000566446 1246 ntBASIC10.1□□□□□ -0.79
SLC1A1P43005 RN7SL262P-201ENST00000584590 294 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms