Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC079602.1-201ENST00000412750 271 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 AC079988.1-201ENST00000432984 544 ntTSL 4 BASIC10.13□□□□□ -0.79
SLC1A1P43005 AL031729.1-201ENST00000433132 192 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 AC245036.2-201ENST00000433549 287 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 RFTN1P1-202ENST00000455527 996 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 LINC01100-201ENST00000471921 740 ntTSL 5 BASIC10.13□□□□□ -0.79
SLC1A1P43005 RPL3P6-201ENST00000474162 1204 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 CCDC169-210ENST00000491049 753 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 NR1I3-220ENST00000505005 985 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 AC090519.1-201ENST00000508195 1002 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 FAM170A-205ENST00000515256 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 FANCD2OS-206ENST00000524279 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 AP001330.1-201ENST00000524287 731 ntTSL 3 BASIC10.13□□□□□ -0.79
SLC1A1P43005 AP003031.2-201ENST00000533945 573 ntTSL 4 BASIC10.13□□□□□ -0.79
SLC1A1P43005 LINC01588-209ENST00000556019 534 ntTSL 3 BASIC10.13□□□□□ -0.79
SLC1A1P43005 AC009779.5-201ENST00000556606 488 ntTSL 3 BASIC10.13□□□□□ -0.79
SLC1A1P43005 AC027682.4-202ENST00000565929 515 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 HMGN2P40-201ENST00000566875 391 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 MT1E-203ENST00000568293 332 ntTSL 2 BASIC10.13□□□□□ -0.79
SLC1A1P43005 LINC00555-201ENST00000569288 442 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 C17orf62-220ENST00000580560 564 ntTSL 4 BASIC10.13□□□□□ -0.79
SLC1A1P43005 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC10.13□□□□□ -0.79
SLC1A1P43005 AP001995.2-201ENST00000602773 897 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 AC025884.3-201ENST00000605422 343 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 AC006058.2-201ENST00000605537 548 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 AC020728.1-201ENST00000605749 1216 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 AL031710.2-201ENST00000621884 722 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 AL445250.1-205ENST00000641631 1094 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 CHCHD5-202ENST00000409719 3272 ntTSL 2 BASIC10.13□□□□□ -0.79
SLC1A1P43005 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 PTPRVP-201ENST00000482597 3999 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 C10orf126-202ENST00000614533 1968 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SLC1A1P43005 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
SLC1A1P43005 VIT-208ENST00000497382 2650 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 ITGB1BP2-205ENST00000538820 1439 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 AC093426.1-201ENST00000561926 3011 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 TMPPE-201ENST00000342462 3962 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
SLC1A1P43005 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 AC018521.7-201ENST00000580282 2927 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 CLUAP1-203ENST00000572600 2221 ntTSL 2 BASIC10.13□□□□□ -0.79
SLC1A1P43005 IRF1-201ENST00000245414 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 UVSSA-201ENST00000324803 4441 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 TOM1L1-210ENST00000572158 1521 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
SLC1A1P43005 PARL-212ENST00000639100 1513 ntTSL 5 BASIC10.12□□□□□ -0.79
SLC1A1P43005 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC10.12□□□□□ -0.79
SLC1A1P43005 GSDMC-204ENST00000619643 1831 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
SLC1A1P43005 LINC01515-201ENST00000433152 1339 ntTSL 5 BASIC10.12□□□□□ -0.79
SLC1A1P43005 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC10.12□□□□□ -0.79
SLC1A1P43005 MAPK10-346ENST00000641737 2633 ntAPPRIS P2 BASIC10.12□□□□□ -0.79
SLC1A1P43005 XPNPEP2-202ENST00000371106 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC10.12□□□□□ -0.79
SLC1A1P43005 PARP6-201ENST00000260376 2142 ntTSL 5 BASIC10.12□□□□□ -0.79
SLC1A1P43005 AL022323.3-201ENST00000623888 5388 ntBASIC10.12□□□□□ -0.79
SLC1A1P43005 ZNF30-204ENST00000601142 2280 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
SLC1A1P43005 DAB2-201ENST00000320816 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 CAPN8-202ENST00000366873 2596 ntTSL 5 BASIC10.12□□□□□ -0.79
SLC1A1P43005 CDRT1-204ENST00000395906 2571 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 RSPRY1-201ENST00000394420 3547 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 TSPAN7-201ENST00000286824 1270 ntTSL 2 BASIC10.12□□□□□ -0.79
SLC1A1P43005 KRTAP8-1-201ENST00000329621 556 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SLC1A1P43005 CLEC4C-202ENST00000360345 970 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 SNORA71C-201ENST00000364642 134 ntBASIC10.12□□□□□ -0.79
SLC1A1P43005 IL31-201ENST00000377035 904 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 C9orf135-201ENST00000377197 873 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 AC007207.1-202ENST00000393388 498 ntTSL 3 BASIC10.12□□□□□ -0.79
SLC1A1P43005 UQCR10-202ENST00000401406 584 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 EIF4E2-206ENST00000409495 1014 ntTSL 2 BASIC10.12□□□□□ -0.79
SLC1A1P43005 TPM3P1-201ENST00000413233 747 ntBASIC10.12□□□□□ -0.79
SLC1A1P43005 RPL15P14-201ENST00000416278 636 ntBASIC10.12□□□□□ -0.79
SLC1A1P43005 AL359738.1-201ENST00000419667 430 ntTSL 5 BASIC10.12□□□□□ -0.79
SLC1A1P43005 AL772155.3-201ENST00000444097 578 ntBASIC10.12□□□□□ -0.79
SLC1A1P43005 AL139287.1-201ENST00000444968 386 ntTSL 3 BASIC10.12□□□□□ -0.79
SLC1A1P43005 AC007272.1-201ENST00000448256 1269 ntTSL 5 BASIC10.12□□□□□ -0.79
SLC1A1P43005 AC083906.3-201ENST00000509201 466 ntTSL 3 BASIC10.12□□□□□ -0.79
SLC1A1P43005 AC112249.1-201ENST00000513916 436 ntBASIC10.12□□□□□ -0.79
SLC1A1P43005 IGLV3-31-201ENST00000523713 297 ntBASIC10.12□□□□□ -0.79
SLC1A1P43005 LYVE1-203ENST00000529598 936 ntTSL 2 BASIC10.12□□□□□ -0.79
SLC1A1P43005 AP003059.2-201ENST00000532979 503 ntTSL 3 BASIC10.12□□□□□ -0.79
SLC1A1P43005 CLEC4C-204ENST00000540085 860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 AC012150.1-201ENST00000553075 593 ntTSL 4 BASIC10.12□□□□□ -0.79
SLC1A1P43005 DIO2-211ENST00000557125 517 ntTSL 3 BASIC10.12□□□□□ -0.79
SLC1A1P43005 TUSC8-202ENST00000607312 628 ntTSL 4 BASIC10.12□□□□□ -0.79
SLC1A1P43005 AL137796.1-201ENST00000608190 577 ntBASIC10.12□□□□□ -0.79
SLC1A1P43005 NOP16-208ENST00000616685 472 ntTSL 3 BASIC10.12□□□□□ -0.79
SLC1A1P43005 ATP6AP1L-201ENST00000380167 2503 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
SLC1A1P43005 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 UGT1A1-202ENST00000360418 3389 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 AL356019.2-201ENST00000556738 3829 ntBASIC10.12□□□□□ -0.79
SLC1A1P43005 LINC01734-201ENST00000412672 1518 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 MID1-211ENST00000610939 1839 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SLC1A1P43005 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms