Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.41■□□□□ 0.7
COMMD3-BMI1R4GMX3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.4■□□□□ 0.7
COMMD3-BMI1R4GMX3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COMMD3-BMI1R4GMX3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COMMD3-BMI1R4GMX3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD3-BMI1R4GMX3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.39■□□□□ 0.69
COMMD3-BMI1R4GMX3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.39■□□□□ 0.69
COMMD3-BMI1R4GMX3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD3-BMI1R4GMX3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD3-BMI1R4GMX3 AL117332.1-201ENST00000622628 974 ntBASIC19.39■□□□□ 0.69
COMMD3-BMI1R4GMX3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
COMMD3-BMI1R4GMX3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD3-BMI1R4GMX3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.39■□□□□ 0.69
COMMD3-BMI1R4GMX3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COMMD3-BMI1R4GMX3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 NEFHP1-201ENST00000412845 2629 ntBASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.38■□□□□ 0.69
COMMD3-BMI1R4GMX3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 AL499627.2-201ENST00000606283 725 ntBASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
COMMD3-BMI1R4GMX3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 KRT16P3-201ENST00000439127 1283 ntBASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COMMD3-BMI1R4GMX3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms