Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC6Q9Y625 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC6Q9Y625 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC6Q9Y625 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC6Q9Y625 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.52■□□□□ 0.72
GPC6Q9Y625 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.52■□□□□ 0.72
GPC6Q9Y625 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC6Q9Y625 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.52■□□□□ 0.72
GPC6Q9Y625 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.52■□□□□ 0.72
GPC6Q9Y625 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC6Q9Y625 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC6Q9Y625 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC6Q9Y625 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.52■□□□□ 0.71
GPC6Q9Y625 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.52■□□□□ 0.71
GPC6Q9Y625 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
GPC6Q9Y625 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
GPC6Q9Y625 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.52■□□□□ 0.71
GPC6Q9Y625 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
GPC6Q9Y625 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
GPC6Q9Y625 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.51■□□□□ 0.71
GPC6Q9Y625 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC6Q9Y625 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
GPC6Q9Y625 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC6Q9Y625 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
GPC6Q9Y625 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
GPC6Q9Y625 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC6Q9Y625 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC6Q9Y625 BX005040.4-201ENST00000637145 1518 ntBASIC19.51■□□□□ 0.71
GPC6Q9Y625 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC6Q9Y625 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.5■□□□□ 0.71
GPC6Q9Y625 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC6Q9Y625 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
GPC6Q9Y625 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.5■□□□□ 0.71
GPC6Q9Y625 ZNRF2P3-201ENST00000424200 374 ntBASIC19.5■□□□□ 0.71
GPC6Q9Y625 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.5■□□□□ 0.71
GPC6Q9Y625 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC6Q9Y625 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
GPC6Q9Y625 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GPC6Q9Y625 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC6Q9Y625 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GPC6Q9Y625 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.5■□□□□ 0.71
GPC6Q9Y625 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
GPC6Q9Y625 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GPC6Q9Y625 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GPC6Q9Y625 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GPC6Q9Y625 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
GPC6Q9Y625 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GPC6Q9Y625 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
GPC6Q9Y625 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GPC6Q9Y625 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.49■□□□□ 0.71
GPC6Q9Y625 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GPC6Q9Y625 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.49■□□□□ 0.71
GPC6Q9Y625 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.49■□□□□ 0.71
GPC6Q9Y625 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
GPC6Q9Y625 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GPC6Q9Y625 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GPC6Q9Y625 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GPC6Q9Y625 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.49■□□□□ 0.71
GPC6Q9Y625 AC005224.4-201ENST00000583262 1652 ntBASIC19.49■□□□□ 0.71
GPC6Q9Y625 AC019069.1-201ENST00000610008 1333 ntBASIC19.49■□□□□ 0.71
GPC6Q9Y625 AL020996.1-203ENST00000536896 2307 ntBASIC19.48■□□□□ 0.71
GPC6Q9Y625 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.48■□□□□ 0.71
GPC6Q9Y625 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.48■□□□□ 0.71
GPC6Q9Y625 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.48■□□□□ 0.71
GPC6Q9Y625 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
GPC6Q9Y625 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.48■□□□□ 0.71
GPC6Q9Y625 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.48■□□□□ 0.71
GPC6Q9Y625 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
GPC6Q9Y625 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC6Q9Y625 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.48■□□□□ 0.71
GPC6Q9Y625 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.48■□□□□ 0.71
GPC6Q9Y625 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
GPC6Q9Y625 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
GPC6Q9Y625 LINC01521-201ENST00000504184 1943 ntBASIC19.47■□□□□ 0.71
GPC6Q9Y625 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC6Q9Y625 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms