Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
USP16Q9Y5T5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
USP16Q9Y5T5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP16Q9Y5T5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
USP16Q9Y5T5 AP003097.1-201ENST00000530657 1135 ntBASIC26.57■■□□□ 1.84
USP16Q9Y5T5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
USP16Q9Y5T5 AL589743.5-201ENST00000616611 1050 ntBASIC26.57■■□□□ 1.84
USP16Q9Y5T5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
USP16Q9Y5T5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
USP16Q9Y5T5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
USP16Q9Y5T5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
USP16Q9Y5T5 CYP21A1P-202ENST00000354927 1481 ntBASIC26.56■■□□□ 1.84
USP16Q9Y5T5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 AC133561.1-201ENST00000568600 2415 ntBASIC26.56■■□□□ 1.84
USP16Q9Y5T5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 AC073648.6-201ENST00000641589 218 ntBASIC26.56■■□□□ 1.84
USP16Q9Y5T5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.56■■□□□ 1.84
USP16Q9Y5T5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 HLA-B-256ENST00000639848 1089 ntBASIC26.55■■□□□ 1.84
USP16Q9Y5T5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP16Q9Y5T5 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.55■■□□□ 1.84
USP16Q9Y5T5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 AC142381.4-202ENST00000563973 229 ntBASIC26.54■■□□□ 1.84
USP16Q9Y5T5 AC060766.5-201ENST00000590539 871 ntBASIC26.54■■□□□ 1.84
USP16Q9Y5T5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.54■■□□□ 1.84
USP16Q9Y5T5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 AC116050.2-201ENST00000612102 1779 ntBASIC26.53■■□□□ 1.84
USP16Q9Y5T5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.53■■□□□ 1.84
USP16Q9Y5T5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 AL158047.1-201ENST00000445918 881 ntBASIC26.52■■□□□ 1.84
USP16Q9Y5T5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
USP16Q9Y5T5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
USP16Q9Y5T5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
USP16Q9Y5T5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
USP16Q9Y5T5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.51■■□□□ 1.83
USP16Q9Y5T5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
USP16Q9Y5T5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
USP16Q9Y5T5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
USP16Q9Y5T5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
USP16Q9Y5T5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
USP16Q9Y5T5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms