Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB3Q9Y5G1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 AL121603.2-201ENST00000557373 2117 ntBASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB3Q9Y5G1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGB3Q9Y5G1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 NTF6G-201ENST00000591094 616 ntBASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 TPRG1LP1-201ENST00000598702 760 ntBASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB3Q9Y5G1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB3Q9Y5G1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB3Q9Y5G1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB3Q9Y5G1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB3Q9Y5G1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB3Q9Y5G1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB3Q9Y5G1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PCDHGB3Q9Y5G1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms