Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SPG7Q9UQ90 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 MME-217ENST00000616757 1315 ntTSL 5 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 ME2-208ENST00000638937 2471 ntTSL 5 BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SPG7Q9UQ90 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 OR2A1-AS1-207ENST00000486094 819 ntBASIC27.21■■□□□ 1.95
SPG7Q9UQ90 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 AC105020.6-201ENST00000621523 1217 ntBASIC27.21■■□□□ 1.95
SPG7Q9UQ90 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 CRK-204ENST00000574295 1391 ntTSL 5 BASIC27.21■■□□□ 1.95
SPG7Q9UQ90 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SPG7Q9UQ90 AC116050.2-201ENST00000612102 1779 ntBASIC27.2■■□□□ 1.95
SPG7Q9UQ90 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SPG7Q9UQ90 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 SLC29A4P2-201ENST00000504749 1089 ntBASIC27.2■■□□□ 1.94
SPG7Q9UQ90 RPPH1-201ENST00000516869 333 ntBASIC27.2■■□□□ 1.94
SPG7Q9UQ90 RNF121-214ENST00000533380 870 ntTSL 3 BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 REXO2-208ENST00000539754 791 ntTSL 2 BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPG7Q9UQ90 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SPG7Q9UQ90 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC27.19■■□□□ 1.94
SPG7Q9UQ90 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
SPG7Q9UQ90 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SPG7Q9UQ90 SOX15-203ENST00000570788 1093 ntBASIC27.19■■□□□ 1.94
SPG7Q9UQ90 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SPG7Q9UQ90 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.19■■□□□ 1.94
SPG7Q9UQ90 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
SPG7Q9UQ90 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SPG7Q9UQ90 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SPG7Q9UQ90 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 C1QBPP2-201ENST00000528754 825 ntBASIC27.18■■□□□ 1.94
SPG7Q9UQ90 RN7SL471P-201ENST00000580476 299 ntBASIC27.18■■□□□ 1.94
SPG7Q9UQ90 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPG7Q9UQ90 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 FAM197Y4-202ENST00000622692 608 ntBASIC27.17■■□□□ 1.94
SPG7Q9UQ90 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SPG7Q9UQ90 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SPG7Q9UQ90 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC27.16■■□□□ 1.94
SPG7Q9UQ90 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms