Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LHX6Q9UPM6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.6■□□□□ 0.73
LHX6Q9UPM6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.6■□□□□ 0.73
LHX6Q9UPM6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.6■□□□□ 0.73
LHX6Q9UPM6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LHX6Q9UPM6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LHX6Q9UPM6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LHX6Q9UPM6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.59■□□□□ 0.73
LHX6Q9UPM6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 AL353708.3-201ENST00000610272 989 ntBASIC19.59■□□□□ 0.73
LHX6Q9UPM6 AC113410.3-201ENST00000623366 203 ntBASIC19.59■□□□□ 0.73
LHX6Q9UPM6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 KRT17P1-201ENST00000399211 1546 ntBASIC19.59■□□□□ 0.73
LHX6Q9UPM6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LHX6Q9UPM6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LHX6Q9UPM6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
LHX6Q9UPM6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LHX6Q9UPM6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LHX6Q9UPM6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 AC005363.2-201ENST00000618631 242 ntBASIC19.58■□□□□ 0.72
LHX6Q9UPM6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LHX6Q9UPM6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LHX6Q9UPM6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LHX6Q9UPM6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LHX6Q9UPM6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.56■□□□□ 0.72
LHX6Q9UPM6 AC079089.2-201ENST00000531211 1277 ntBASIC19.56■□□□□ 0.72
LHX6Q9UPM6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.56■□□□□ 0.72
LHX6Q9UPM6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LHX6Q9UPM6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.56■□□□□ 0.72
LHX6Q9UPM6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.56■□□□□ 0.72
LHX6Q9UPM6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LHX6Q9UPM6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LHX6Q9UPM6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.56■□□□□ 0.72
LHX6Q9UPM6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 AL355472.2-201ENST00000422958 438 ntBASIC19.55■□□□□ 0.72
LHX6Q9UPM6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX6Q9UPM6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 ANOS2P-203ENST00000472227 1816 ntBASIC19.54■□□□□ 0.72
LHX6Q9UPM6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms