Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 POU5F1P4-201ENST00000413175 1085 ntBASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPIPA1Q9UND3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 MKRN4P-201ENST00000444706 1521 ntBASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 AC098934.4-201ENST00000564127 592 ntBASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPIPA1Q9UND3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 AC007322.4-201ENST00000509611 723 ntBASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 AC069236.1-201ENST00000604339 616 ntBASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPIPA1Q9UND3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPIPA1Q9UND3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPIPA1Q9UND3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.08■□□□□ 0.65
NPIPA1Q9UND3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
NPIPA1Q9UND3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPIPA1Q9UND3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 MIR4758-201ENST00000577688 71 ntBASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 AC016405.3-201ENST00000607710 860 ntBASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 OR10C1-204ENST00000622521 1039 ntBASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPIPA1Q9UND3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 MIPEPP3-201ENST00000412105 444 ntBASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 AC007375.3-201ENST00000600936 2314 ntBASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPIPA1Q9UND3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPIPA1Q9UND3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms