Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.65■■□□□ 1.86
CCNL1Q9UK58 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.65■■□□□ 1.86
CCNL1Q9UK58 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CCNL1Q9UK58 AC012306.2-201ENST00000609350 630 ntBASIC26.65■■□□□ 1.86
CCNL1Q9UK58 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.65■■□□□ 1.86
CCNL1Q9UK58 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCNL1Q9UK58 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.65■■□□□ 1.86
CCNL1Q9UK58 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC26.65■■□□□ 1.86
CCNL1Q9UK58 AL135905.2-201ENST00000584934 1404 ntBASIC26.65■■□□□ 1.86
CCNL1Q9UK58 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 PPOX-219ENST00000544598 813 ntTSL 2 BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CCNL1Q9UK58 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.64■■□□□ 1.85
CCNL1Q9UK58 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CCNL1Q9UK58 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CCNL1Q9UK58 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CCNL1Q9UK58 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CCNL1Q9UK58 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 AL355075.4-201ENST00000554988 638 ntBASIC26.62■■□□□ 1.85
CCNL1Q9UK58 C2orf69P4-201ENST00000565394 541 ntBASIC26.62■■□□□ 1.85
CCNL1Q9UK58 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 AC110285.5-201ENST00000611501 352 ntBASIC26.62■■□□□ 1.85
CCNL1Q9UK58 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCNL1Q9UK58 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.61■■□□□ 1.85
CCNL1Q9UK58 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 AC093323.1-202ENST00000635031 2045 ntBASIC26.6■■□□□ 1.85
CCNL1Q9UK58 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 GGT1-206ENST00000404223 952 ntTSL 2 BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 KRASP1-201ENST00000407852 552 ntBASIC26.6■■□□□ 1.85
CCNL1Q9UK58 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 AL445228.2-201ENST00000605589 952 ntBASIC26.6■■□□□ 1.85
CCNL1Q9UK58 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 AC120498.8-201ENST00000614275 531 ntBASIC26.6■■□□□ 1.85
CCNL1Q9UK58 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCNL1Q9UK58 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCNL1Q9UK58 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.59■■□□□ 1.85
CCNL1Q9UK58 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CCNL1Q9UK58 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
CCNL1Q9UK58 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.59■■□□□ 1.85
CCNL1Q9UK58 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCNL1Q9UK58 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC26.59■■□□□ 1.85
CCNL1Q9UK58 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CCNL1Q9UK58 AC092053.2-201ENST00000640557 1818 ntBASIC26.59■■□□□ 1.85
CCNL1Q9UK58 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCNL1Q9UK58 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.59■■□□□ 1.85
CCNL1Q9UK58 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms