Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 GUSBP6-202ENST00000438529 1198 ntBASIC22.27■■□□□ 1.16
SIX4Q9UIU6 AC093787.1-201ENST00000450396 207 ntBASIC22.27■■□□□ 1.16
SIX4Q9UIU6 AC083906.2-201ENST00000511578 360 ntBASIC22.27■■□□□ 1.16
SIX4Q9UIU6 RARRES2P4-201ENST00000514074 484 ntBASIC22.27■■□□□ 1.16
SIX4Q9UIU6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.27■■□□□ 1.16
SIX4Q9UIU6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SIX4Q9UIU6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.26■■□□□ 1.15
SIX4Q9UIU6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIX4Q9UIU6 ID1-201ENST00000376105 1233 ntBASIC22.26■■□□□ 1.15
SIX4Q9UIU6 HLA-L-209ENST00000420110 1011 ntBASIC22.26■■□□□ 1.15
SIX4Q9UIU6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.26■■□□□ 1.15
SIX4Q9UIU6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIX4Q9UIU6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.26■■□□□ 1.15
SIX4Q9UIU6 AL121832.2-201ENST00000610979 668 ntBASIC22.26■■□□□ 1.15
SIX4Q9UIU6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.26■■□□□ 1.15
SIX4Q9UIU6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.26■■□□□ 1.15
SIX4Q9UIU6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SIX4Q9UIU6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX4Q9UIU6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX4Q9UIU6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX4Q9UIU6 AC005229.4-201ENST00000610085 2198 ntBASIC22.25■■□□□ 1.15
SIX4Q9UIU6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIX4Q9UIU6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIX4Q9UIU6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIX4Q9UIU6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.25■■□□□ 1.15
SIX4Q9UIU6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.25■■□□□ 1.15
SIX4Q9UIU6 FAM21FP-204ENST00000608637 956 ntBASIC22.25■■□□□ 1.15
SIX4Q9UIU6 OR10C1-204ENST00000622521 1039 ntBASIC22.25■■□□□ 1.15
SIX4Q9UIU6 AC116050.2-201ENST00000612102 1779 ntBASIC22.25■■□□□ 1.15
SIX4Q9UIU6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 GPX1P1-201ENST00000388829 606 ntBASIC22.24■■□□□ 1.15
SIX4Q9UIU6 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.24■■□□□ 1.15
SIX4Q9UIU6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 AC007322.3-201ENST00000426526 701 ntBASIC22.24■■□□□ 1.15
SIX4Q9UIU6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 AF201337.1-201ENST00000520239 748 ntBASIC22.24■■□□□ 1.15
SIX4Q9UIU6 AC105036.2-201ENST00000569468 176 ntBASIC22.24■■□□□ 1.15
SIX4Q9UIU6 AC104771.1-201ENST00000603335 964 ntBASIC22.24■■□□□ 1.15
SIX4Q9UIU6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIX4Q9UIU6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 CDV3P1-201ENST00000471403 739 ntBASIC22.23■■□□□ 1.15
SIX4Q9UIU6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 AC069236.1-201ENST00000604339 616 ntBASIC22.23■■□□□ 1.15
SIX4Q9UIU6 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIX4Q9UIU6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX4Q9UIU6 TSPY6P-201ENST00000448518 926 ntBASIC22.22■■□□□ 1.15
SIX4Q9UIU6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX4Q9UIU6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SIX4Q9UIU6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SIX4Q9UIU6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
SIX4Q9UIU6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SIX4Q9UIU6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIX4Q9UIU6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SIX4Q9UIU6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SIX4Q9UIU6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.21■■□□□ 1.15
SIX4Q9UIU6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SIX4Q9UIU6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX4Q9UIU6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
SIX4Q9UIU6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SIX4Q9UIU6 AL512625.2-201ENST00000417533 625 ntBASIC22.21■■□□□ 1.15
SIX4Q9UIU6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
SIX4Q9UIU6 AL109923.1-201ENST00000618799 583 ntBASIC22.21■■□□□ 1.15
SIX4Q9UIU6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX4Q9UIU6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIX4Q9UIU6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SIX4Q9UIU6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.21■■□□□ 1.15
SIX4Q9UIU6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIX4Q9UIU6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SIX4Q9UIU6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIX4Q9UIU6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms