Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.04■□□□□ 0.64
LRFN1Q9P244 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.04■□□□□ 0.64
LRFN1Q9P244 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.04■□□□□ 0.64
LRFN1Q9P244 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRFN1Q9P244 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN1Q9P244 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN1Q9P244 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN1Q9P244 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN1Q9P244 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN1Q9P244 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN1Q9P244 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.03■□□□□ 0.64
LRFN1Q9P244 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRFN1Q9P244 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN1Q9P244 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.03■□□□□ 0.64
LRFN1Q9P244 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
LRFN1Q9P244 AC097658.1-201ENST00000475555 843 ntBASIC19.03■□□□□ 0.64
LRFN1Q9P244 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
LRFN1Q9P244 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN1Q9P244 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LRFN1Q9P244 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN1Q9P244 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LRFN1Q9P244 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN1Q9P244 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
LRFN1Q9P244 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LRFN1Q9P244 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 LSM12P1-201ENST00000411836 588 ntBASIC19.02■□□□□ 0.64
LRFN1Q9P244 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.02■□□□□ 0.64
LRFN1Q9P244 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.02■□□□□ 0.64
LRFN1Q9P244 AC007322.3-201ENST00000426526 701 ntBASIC19.02■□□□□ 0.64
LRFN1Q9P244 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.02■□□□□ 0.64
LRFN1Q9P244 RNA5SP413-201ENST00000516373 109 ntBASIC19.02■□□□□ 0.64
LRFN1Q9P244 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.02■□□□□ 0.64
LRFN1Q9P244 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.02■□□□□ 0.64
LRFN1Q9P244 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.02■□□□□ 0.64
LRFN1Q9P244 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN1Q9P244 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRFN1Q9P244 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LRFN1Q9P244 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN1Q9P244 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN1Q9P244 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN1Q9P244 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN1Q9P244 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN1Q9P244 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRFN1Q9P244 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.01■□□□□ 0.63
LRFN1Q9P244 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.01■□□□□ 0.63
LRFN1Q9P244 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.01■□□□□ 0.63
LRFN1Q9P244 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN1Q9P244 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN1Q9P244 AC100791.3-201ENST00000617619 330 ntBASIC19.01■□□□□ 0.63
LRFN1Q9P244 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN1Q9P244 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN1Q9P244 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRFN1Q9P244 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRFN1Q9P244 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19■□□□□ 0.63
LRFN1Q9P244 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN1Q9P244 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRFN1Q9P244 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN1Q9P244 DUSP5P2-201ENST00000426873 1033 ntBASIC19■□□□□ 0.63
LRFN1Q9P244 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19■□□□□ 0.63
LRFN1Q9P244 AC091874.3-201ENST00000512672 1195 ntBASIC19■□□□□ 0.63
LRFN1Q9P244 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRFN1Q9P244 MIR4651-201ENST00000582622 73 ntBASIC19■□□□□ 0.63
LRFN1Q9P244 TMEM191A-211ENST00000637163 1067 ntBASIC19■□□□□ 0.63
LRFN1Q9P244 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19■□□□□ 0.63
LRFN1Q9P244 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN1Q9P244 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN1Q9P244 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN1Q9P244 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN1Q9P244 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN1Q9P244 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN1Q9P244 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.99■□□□□ 0.63
LRFN1Q9P244 AL355472.2-201ENST00000422958 438 ntBASIC18.99■□□□□ 0.63
LRFN1Q9P244 FAM201B-201ENST00000458407 597 ntBASIC18.99■□□□□ 0.63
LRFN1Q9P244 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN1Q9P244 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN1Q9P244 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN1Q9P244 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.99■□□□□ 0.63
LRFN1Q9P244 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN1Q9P244 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms