Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 AC241377.3-202ENST00000626088 1088 ntBASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 AC241585.3-202ENST00000628937 1088 ntBASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 AC245100.8-202ENST00000629247 1058 ntBASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 AC099791.1-201ENST00000416440 715 ntBASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2LQ9NUG4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 AL162377.1-201ENST00000618844 1793 ntBASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 AC087239.1-201ENST00000622671 572 ntBASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 AC007225.1-201ENST00000566331 1836 ntBASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
CCM2LQ9NUG4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 AC010141.3-201ENST00000456659 717 ntBASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 AC121338.2-201ENST00000622535 1744 ntBASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2LQ9NUG4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.64■□□□□ 0.74
CCM2LQ9NUG4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.64■□□□□ 0.74
CCM2LQ9NUG4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 AC022517.1-201ENST00000592429 346 ntBASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 AC099791.2-201ENST00000605725 427 ntBASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2LQ9NUG4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms