Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 SLC7A5P1-201ENST00000568957 537 ntBASIC20.71■□□□□ 0.91
TREX1Q9NSU2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
TREX1Q9NSU2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 AC073314.1-201ENST00000568729 2216 ntBASIC20.7■□□□□ 0.9
TREX1Q9NSU2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 KRT19P1-201ENST00000405746 1186 ntBASIC20.7■□□□□ 0.9
TREX1Q9NSU2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 MIR6821-201ENST00000617625 74 ntBASIC20.7■□□□□ 0.9
TREX1Q9NSU2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.7■□□□□ 0.9
TREX1Q9NSU2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TREX1Q9NSU2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 AC243732.1-201ENST00000612648 864 ntBASIC20.68■□□□□ 0.9
TREX1Q9NSU2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 GABARAPL3-202ENST00000624044 1851 ntBASIC20.68■□□□□ 0.9
TREX1Q9NSU2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TREX1Q9NSU2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 AC034268.1-201ENST00000441047 882 ntBASIC20.67■□□□□ 0.9
TREX1Q9NSU2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 AC019069.1-201ENST00000610008 1333 ntBASIC20.67■□□□□ 0.9
TREX1Q9NSU2 RBM17P2-201ENST00000616397 1405 ntBASIC20.67■□□□□ 0.9
TREX1Q9NSU2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TREX1Q9NSU2 AC027702.1-201ENST00000563810 1770 ntBASIC20.67■□□□□ 0.9
TREX1Q9NSU2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TREX1Q9NSU2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.66■□□□□ 0.9
TREX1Q9NSU2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.66■□□□□ 0.9
TREX1Q9NSU2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.66■□□□□ 0.9
TREX1Q9NSU2 AC087623.3-201ENST00000607047 1098 ntBASIC20.66■□□□□ 0.9
TREX1Q9NSU2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TREX1Q9NSU2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms