Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 POU5F1P4-201ENST00000413175 1085 ntBASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDLIM7Q9NR12 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 LSM12P1-201ENST00000411836 588 ntBASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PDLIM7Q9NR12 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 FAM210CP-201ENST00000445714 574 ntBASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDLIM7Q9NR12 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
PDLIM7Q9NR12 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.33■■□□□ 1.32
PDLIM7Q9NR12 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
PDLIM7Q9NR12 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.33■■□□□ 1.32
PDLIM7Q9NR12 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
PDLIM7Q9NR12 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 AC243732.1-201ENST00000612648 864 ntBASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 KRT16P2-201ENST00000414673 1423 ntBASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDLIM7Q9NR12 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 RPPH1-201ENST00000516869 333 ntBASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 FAM197Y4-202ENST00000622692 608 ntBASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDLIM7Q9NR12 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDLIM7Q9NR12 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
PDLIM7Q9NR12 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms