Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC52A3Q9NQ40 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 AL136162.1-201ENST00000607711 1078 ntBASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC52A3Q9NQ40 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC52A3Q9NQ40 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC52A3Q9NQ40 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC52A3Q9NQ40 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 AP004607.4-201ENST00000530158 1459 ntBASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 TSPY26P-201ENST00000476365 1326 ntBASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 AC135279.3-201ENST00000610945 1311 ntBASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 AC099791.1-201ENST00000416440 715 ntBASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 AC008764.7-201ENST00000593779 1081 ntBASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
SLC52A3Q9NQ40 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms