Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.7■□□□□ 0.42
GCM1Q9NP62 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.7■□□□□ 0.42
GCM1Q9NP62 MFSD11-216ENST00000590393 1141 ntBASIC17.7■□□□□ 0.42
GCM1Q9NP62 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCM1Q9NP62 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCM1Q9NP62 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.69■□□□□ 0.42
GCM1Q9NP62 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.69■□□□□ 0.42
GCM1Q9NP62 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCM1Q9NP62 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCM1Q9NP62 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCM1Q9NP62 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCM1Q9NP62 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.69■□□□□ 0.42
GCM1Q9NP62 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.69■□□□□ 0.42
GCM1Q9NP62 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.69■□□□□ 0.42
GCM1Q9NP62 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GCM1Q9NP62 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.69■□□□□ 0.42
GCM1Q9NP62 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCM1Q9NP62 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCM1Q9NP62 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.69■□□□□ 0.42
GCM1Q9NP62 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCM1Q9NP62 Z98882.1-201ENST00000622160 2253 ntBASIC17.69■□□□□ 0.42
GCM1Q9NP62 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GCM1Q9NP62 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.69■□□□□ 0.42
GCM1Q9NP62 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
GCM1Q9NP62 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GCM1Q9NP62 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.68■□□□□ 0.42
GCM1Q9NP62 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.68■□□□□ 0.42
GCM1Q9NP62 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.68■□□□□ 0.42
GCM1Q9NP62 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
GCM1Q9NP62 AC080038.1-201ENST00000611274 1154 ntBASIC17.68■□□□□ 0.42
GCM1Q9NP62 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GCM1Q9NP62 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
GCM1Q9NP62 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GCM1Q9NP62 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.68■□□□□ 0.42
GCM1Q9NP62 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.68■□□□□ 0.42
GCM1Q9NP62 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.67■□□□□ 0.42
GCM1Q9NP62 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCM1Q9NP62 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCM1Q9NP62 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCM1Q9NP62 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCM1Q9NP62 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
GCM1Q9NP62 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.67■□□□□ 0.42
GCM1Q9NP62 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GCM1Q9NP62 AC010536.3-201ENST00000620306 533 ntBASIC17.67■□□□□ 0.42
GCM1Q9NP62 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.67■□□□□ 0.42
GCM1Q9NP62 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCM1Q9NP62 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GCM1Q9NP62 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GCM1Q9NP62 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.66■□□□□ 0.42
GCM1Q9NP62 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GCM1Q9NP62 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GCM1Q9NP62 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.65■□□□□ 0.42
GCM1Q9NP62 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GCM1Q9NP62 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GCM1Q9NP62 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GCM1Q9NP62 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.65■□□□□ 0.42
GCM1Q9NP62 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GCM1Q9NP62 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GCM1Q9NP62 DUX4L16-201ENST00000555130 1264 ntBASIC17.65■□□□□ 0.42
GCM1Q9NP62 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GCM1Q9NP62 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms