Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.56■□□□□ 0.56
SEC61A2Q9H9S3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A2Q9H9S3 AP004607.4-201ENST00000530158 1459 ntBASIC18.56■□□□□ 0.56
SEC61A2Q9H9S3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SEC61A2Q9H9S3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.56■□□□□ 0.56
SEC61A2Q9H9S3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A2Q9H9S3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SEC61A2Q9H9S3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC61A2Q9H9S3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SEC61A2Q9H9S3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 IKBKGP1-201ENST00000612193 1073 ntBASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 AC092666.2-201ENST00000613287 246 ntBASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 AL049796.1-201ENST00000565336 1766 ntBASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.55■□□□□ 0.56
SEC61A2Q9H9S3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 AC053503.5-201ENST00000601508 636 ntBASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SEC61A2Q9H9S3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SEC61A2Q9H9S3 KRT87P-202ENST00000534226 1464 ntBASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 EEF1DP3-203ENST00000566025 782 ntBASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 AC022517.1-201ENST00000592429 346 ntBASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEC61A2Q9H9S3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.52■□□□□ 0.55
SEC61A2Q9H9S3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SEC61A2Q9H9S3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.52■□□□□ 0.55
SEC61A2Q9H9S3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SEC61A2Q9H9S3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 AC092437.1-201ENST00000624794 1048 ntBASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms