Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NDST4Q9H3R1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
NDST4Q9H3R1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
NDST4Q9H3R1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.58■■□□□ 1.2
NDST4Q9H3R1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NDST4Q9H3R1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
NDST4Q9H3R1 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.58■■□□□ 1.2
NDST4Q9H3R1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.58■■□□□ 1.2
NDST4Q9H3R1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NDST4Q9H3R1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 LINC02228-203ENST00000641970 1355 ntBASIC22.56■■□□□ 1.2
NDST4Q9H3R1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 FP700111.2-201ENST00000619190 1892 ntBASIC22.56■■□□□ 1.2
NDST4Q9H3R1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NDST4Q9H3R1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDST4Q9H3R1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 RARRES2P11-201ENST00000635158 484 ntBASIC22.54■■□□□ 1.2
NDST4Q9H3R1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.54■■□□□ 1.2
NDST4Q9H3R1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NDST4Q9H3R1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NDST4Q9H3R1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
NDST4Q9H3R1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDST4Q9H3R1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDST4Q9H3R1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDST4Q9H3R1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.53■■□□□ 1.2
NDST4Q9H3R1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.53■■□□□ 1.2
NDST4Q9H3R1 KRT16P2-201ENST00000414673 1423 ntBASIC22.53■■□□□ 1.2
NDST4Q9H3R1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.53■■□□□ 1.2
NDST4Q9H3R1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDST4Q9H3R1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 215 ms