Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 LSM12P1-201ENST00000411836 588 ntBASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 FAM21FP-204ENST00000608637 956 ntBASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 AC066615.1-201ENST00000640911 628 ntBASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3LQ9H3M9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 KRT18P29-201ENST00000397031 1267 ntBASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ATXN3LQ9H3M9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ATXN3LQ9H3M9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ATXN3LQ9H3M9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.77■■□□□ 1.07
ATXN3LQ9H3M9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 AL355472.2-201ENST00000422958 438 ntBASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3LQ9H3M9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 ITM2C-210ENST00000620962 501 ntBASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3LQ9H3M9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.74■■□□□ 1.07
ATXN3LQ9H3M9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms