Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 CNN2P6-201ENST00000439038 900 ntBASIC14.38□□□□□ -0.11
UPK3BQ9BT76 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 GUSBP5-202ENST00000510805 1989 ntBASIC14.38□□□□□ -0.11
UPK3BQ9BT76 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK3BQ9BT76 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 GALC-202ENST00000393568 2054 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 HLA-L-209ENST00000420110 1011 ntBASIC14.37□□□□□ -0.11
UPK3BQ9BT76 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 AL162412.1-201ENST00000567129 965 ntBASIC14.37□□□□□ -0.11
UPK3BQ9BT76 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 AL121832.2-201ENST00000610979 668 ntBASIC14.37□□□□□ -0.11
UPK3BQ9BT76 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK3BQ9BT76 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 AC233723.2-201ENST00000623798 2106 ntBASIC14.36□□□□□ -0.11
UPK3BQ9BT76 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 GPX1P1-201ENST00000388829 606 ntBASIC14.36□□□□□ -0.11
UPK3BQ9BT76 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.36□□□□□ -0.11
UPK3BQ9BT76 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK3BQ9BT76 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 ECEL1P1-201ENST00000373592 1742 ntBASIC14.35□□□□□ -0.11
UPK3BQ9BT76 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 RBM17P2-201ENST00000616397 1405 ntBASIC14.35□□□□□ -0.11
UPK3BQ9BT76 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK3BQ9BT76 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms