Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.15■□□□□ 0.66
TM9SF2Q99805 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.15■□□□□ 0.66
TM9SF2Q99805 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF2Q99805 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF2Q99805 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.15■□□□□ 0.66
TM9SF2Q99805 KRT18P11-201ENST00000435214 1283 ntBASIC19.15■□□□□ 0.66
TM9SF2Q99805 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF2Q99805 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF2Q99805 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TM9SF2Q99805 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.14■□□□□ 0.66
TM9SF2Q99805 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TM9SF2Q99805 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF2Q99805 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF2Q99805 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.14■□□□□ 0.65
TM9SF2Q99805 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.14■□□□□ 0.65
TM9SF2Q99805 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TM9SF2Q99805 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.14■□□□□ 0.65
TM9SF2Q99805 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF2Q99805 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.14■□□□□ 0.65
TM9SF2Q99805 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF2Q99805 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF2Q99805 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TM9SF2Q99805 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF2Q99805 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.14■□□□□ 0.65
TM9SF2Q99805 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF2Q99805 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF2Q99805 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF2Q99805 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TM9SF2Q99805 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
TM9SF2Q99805 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.13■□□□□ 0.65
TM9SF2Q99805 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.13■□□□□ 0.65
TM9SF2Q99805 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
TM9SF2Q99805 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TM9SF2Q99805 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF2Q99805 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF2Q99805 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF2Q99805 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF2Q99805 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF2Q99805 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF2Q99805 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.12■□□□□ 0.65
TM9SF2Q99805 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF2Q99805 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF2Q99805 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.12■□□□□ 0.65
TM9SF2Q99805 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF2Q99805 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF2Q99805 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF2Q99805 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.12■□□□□ 0.65
TM9SF2Q99805 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TM9SF2Q99805 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF2Q99805 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF2Q99805 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.11■□□□□ 0.65
TM9SF2Q99805 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TM9SF2Q99805 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.11■□□□□ 0.65
TM9SF2Q99805 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.11■□□□□ 0.65
TM9SF2Q99805 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.11■□□□□ 0.65
TM9SF2Q99805 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.11■□□□□ 0.65
TM9SF2Q99805 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.11■□□□□ 0.65
TM9SF2Q99805 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF2Q99805 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TM9SF2Q99805 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF2Q99805 AC055733.4-201ENST00000638462 1354 ntBASIC19.1■□□□□ 0.65
TM9SF2Q99805 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF2Q99805 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF2Q99805 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.1■□□□□ 0.65
TM9SF2Q99805 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF2Q99805 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TM9SF2Q99805 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF2Q99805 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.1■□□□□ 0.65
TM9SF2Q99805 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF2Q99805 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.1■□□□□ 0.65
TM9SF2Q99805 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.1■□□□□ 0.65
TM9SF2Q99805 AC080038.1-201ENST00000611274 1154 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms