Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV9Q99603 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.15■□□□□ 0.18
TRGV9Q99603 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRGV9Q99603 AC011484.1-201ENST00000377652 1995 ntBASIC16.15■□□□□ 0.18
TRGV9Q99603 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TRGV9Q99603 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV9Q99603 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV9Q99603 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.15■□□□□ 0.18
TRGV9Q99603 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.15■□□□□ 0.18
TRGV9Q99603 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV9Q99603 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV9Q99603 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRGV9Q99603 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRGV9Q99603 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV9Q99603 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV9Q99603 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
TRGV9Q99603 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV9Q99603 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV9Q99603 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV9Q99603 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV9Q99603 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
TRGV9Q99603 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.14■□□□□ 0.17
TRGV9Q99603 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV9Q99603 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV9Q99603 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV9Q99603 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV9Q99603 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV9Q99603 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV9Q99603 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TRGV9Q99603 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV9Q99603 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV9Q99603 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 EDA-201ENST00000338901 1233 ntBASIC16.13■□□□□ 0.17
TRGV9Q99603 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRGV9Q99603 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRGV9Q99603 PBX2P1-201ENST00000493219 1291 ntBASIC16.13■□□□□ 0.17
TRGV9Q99603 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV9Q99603 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.13■□□□□ 0.17
TRGV9Q99603 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV9Q99603 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV9Q99603 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.13■□□□□ 0.17
TRGV9Q99603 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV9Q99603 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRGV9Q99603 FP700111.2-201ENST00000619190 1892 ntBASIC16.13■□□□□ 0.17
TRGV9Q99603 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
TRGV9Q99603 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV9Q99603 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV9Q99603 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV9Q99603 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV9Q99603 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV9Q99603 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.12■□□□□ 0.17
TRGV9Q99603 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV9Q99603 AP001330.3-201ENST00000520123 633 ntBASIC16.12■□□□□ 0.17
TRGV9Q99603 AC106739.1-201ENST00000617035 715 ntBASIC16.12■□□□□ 0.17
TRGV9Q99603 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV9Q99603 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV9Q99603 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV9Q99603 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV9Q99603 RASA4CP-201ENST00000424092 1398 ntBASIC16.12■□□□□ 0.17
TRGV9Q99603 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRGV9Q99603 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms