Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC30.01■■■□□ 2.4
SCAF11Q99590 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC30.01■■■□□ 2.4
SCAF11Q99590 AC012306.2-201ENST00000609350 630 ntBASIC30.01■■■□□ 2.4
SCAF11Q99590 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC30.01■■■□□ 2.39
SCAF11Q99590 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC30.01■■■□□ 2.39
SCAF11Q99590 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SCAF11Q99590 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
SCAF11Q99590 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SCAF11Q99590 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC30■■■□□ 2.39
SCAF11Q99590 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SCAF11Q99590 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC30■■■□□ 2.39
SCAF11Q99590 CDV3P1-201ENST00000471403 739 ntBASIC30■■■□□ 2.39
SCAF11Q99590 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC30■■■□□ 2.39
SCAF11Q99590 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC30■■■□□ 2.39
SCAF11Q99590 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC30■■■□□ 2.39
SCAF11Q99590 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC29.99■■■□□ 2.39
SCAF11Q99590 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC29.99■■■□□ 2.39
SCAF11Q99590 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC29.99■■■□□ 2.39
SCAF11Q99590 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
SCAF11Q99590 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SCAF11Q99590 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SCAF11Q99590 MFF-205ENST00000354503 1085 ntTSL 2 BASIC29.99■■■□□ 2.39
SCAF11Q99590 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
SCAF11Q99590 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SCAF11Q99590 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SCAF11Q99590 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC29.99■■■□□ 2.39
SCAF11Q99590 PPOX-219ENST00000544598 813 ntTSL 2 BASIC29.99■■■□□ 2.39
SCAF11Q99590 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SCAF11Q99590 AL049637.2-201ENST00000641778 930 ntBASIC29.99■■■□□ 2.39
SCAF11Q99590 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SCAF11Q99590 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC29.98■■■□□ 2.39
SCAF11Q99590 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC29.98■■■□□ 2.39
SCAF11Q99590 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
SCAF11Q99590 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF11Q99590 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF11Q99590 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF11Q99590 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF11Q99590 SERF2-207ENST00000409614 582 ntTSL 2 BASIC29.98■■■□□ 2.39
SCAF11Q99590 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCAF11Q99590 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC29.98■■■□□ 2.39
SCAF11Q99590 REXO2-208ENST00000539754 791 ntTSL 2 BASIC29.98■■■□□ 2.39
SCAF11Q99590 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC29.98■■■□□ 2.39
SCAF11Q99590 TK2-213ENST00000563369 882 ntTSL 5 BASIC29.98■■■□□ 2.39
SCAF11Q99590 AC097493.4-201ENST00000641197 219 ntBASIC29.98■■■□□ 2.39
SCAF11Q99590 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF11Q99590 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
SCAF11Q99590 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF11Q99590 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC29.97■■■□□ 2.39
SCAF11Q99590 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF11Q99590 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF11Q99590 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF11Q99590 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC29.97■■■□□ 2.39
SCAF11Q99590 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
SCAF11Q99590 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF11Q99590 AC092053.2-201ENST00000640557 1818 ntBASIC29.97■■■□□ 2.39
SCAF11Q99590 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SCAF11Q99590 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC29.96■■■□□ 2.39
SCAF11Q99590 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
SCAF11Q99590 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF11Q99590 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF11Q99590 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC29.96■■■□□ 2.39
SCAF11Q99590 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
SCAF11Q99590 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
SCAF11Q99590 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF11Q99590 KRT17P2-201ENST00000300992 1314 ntBASIC29.96■■■□□ 2.39
SCAF11Q99590 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF11Q99590 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF11Q99590 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF11Q99590 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF11Q99590 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC29.96■■■□□ 2.39
SCAF11Q99590 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
SCAF11Q99590 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC29.96■■■□□ 2.39
SCAF11Q99590 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC29.96■■■□□ 2.39
SCAF11Q99590 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF11Q99590 AC133561.5-201ENST00000635547 218 ntBASIC29.96■■■□□ 2.39
SCAF11Q99590 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
SCAF11Q99590 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SCAF11Q99590 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC29.96■■■□□ 2.39
SCAF11Q99590 CRK-204ENST00000574295 1391 ntTSL 5 BASIC29.95■■■□□ 2.39
SCAF11Q99590 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
SCAF11Q99590 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SCAF11Q99590 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC29.95■■■□□ 2.39
SCAF11Q99590 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC29.95■■■□□ 2.39
SCAF11Q99590 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC29.95■■■□□ 2.39
SCAF11Q99590 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC29.95■■■□□ 2.39
SCAF11Q99590 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC29.95■■■□□ 2.39
SCAF11Q99590 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
SCAF11Q99590 AC124016.1-201ENST00000609552 612 ntBASIC29.95■■■□□ 2.39
SCAF11Q99590 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SCAF11Q99590 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC29.95■■■□□ 2.38
SCAF11Q99590 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC29.95■■■□□ 2.38
SCAF11Q99590 GCK-205ENST00000437084 1385 ntTSL 5 BASIC29.95■■■□□ 2.38
SCAF11Q99590 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
SCAF11Q99590 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SCAF11Q99590 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC29.94■■■□□ 2.38
SCAF11Q99590 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SCAF11Q99590 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
SCAF11Q99590 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC29.94■■■□□ 2.38
SCAF11Q99590 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SCAF11Q99590 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms