Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 Z98882.1-201ENST00000622160 2253 ntBASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.56■■□□□ 1.04
CDK5RAP1Q96SZ6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 AC069152.1-201ENST00000438030 544 ntBASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 AC092118.2-201ENST00000613495 667 ntBASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.55■■□□□ 1.04
CDK5RAP1Q96SZ6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 AL138781.1-201ENST00000566567 1274 ntBASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP1Q96SZ6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 MCRIP2P1-201ENST00000394346 511 ntBASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 BX276092.2-201ENST00000417668 665 ntBASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CDK5RAP1Q96SZ6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.52■■□□□ 1.04
CDK5RAP1Q96SZ6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDK5RAP1Q96SZ6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDK5RAP1Q96SZ6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDK5RAP1Q96SZ6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP1Q96SZ6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms